SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/1017
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
301 br--0942
672bp
chromo22/Bm_scaf18
5904300bp
UniRef50_A5A602 (38%/44)
Cluster: Cellulose synthase 2; n=9; Phytophthora|Rep: Cellulose synthase 2 - Phytophthora ramorum (Sudden oak death agent)
GO:0016491 F oxidoreductase activity
GO:0051536 F iron-sulfur cluster binding
302 br--0943
680bp
chromo24/Bm_scaf115
864725bp
UniRef50_Q1HQ01 (96%/83)
Cluster: Ferritin isoform 2; n=1; Bombyx mori|Rep: Ferritin isoform 2 - Bombyx mori (Silk moth)
GO:0005488 F binding
GO:0006826 P iron ion transport
GO:0006879 P cellular iron ion homeostasis
GO:0008199 F ferric iron binding
GO:0016491 F oxidoreductase activity
GO:0046914 F transition metal ion binding
GO:0008043 C intracellular ferritin complex
GO:0008198 F ferrous iron binding
303 br--0948
675bp
chromo3/Bm_scaf17
6395444bp
UniRef50_Q4RQD9 (64%/87)
Cluster: Chromosome 17 SCAF15006, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 17 SCAF15006, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
304 br--0950
680bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q99K70-2 (85%/83)
Cluster: Isoform 2 of Q99K70 ; n=1; Mus musculus|Rep: Isoform 2 of Q99K70 - Mus musculus (Mouse)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
305 br--0954
673bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q4GXN1 (86%/81)
Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep: Ribosomal protein L5e - Hister sp. APV-2005
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
306 br--0958
403bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GP16 (98%/82)
Cluster: 60S ribosomal protein L31; n=27; Coelomata|Rep: 60S ribosomal protein L31 - Heliothis virescens (Noctuid moth) (Owlet moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
307 br--0961
569bp
chromo16/Bm_scaf39
3876397bp
UniRef50_UPI00015B4CE0 (49%/111)
Cluster: PREDICTED: similar to Srb7p: RNA polymerase II holoenzyme component, putative; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Srb7p: RNA polymerase II holoenzyme component, putative - Nasonia vitripennis
GO:0000119 C mediator complex
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005665 C RNA polymerase II, core complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0040010 P positive regulation of growth rate
308 br--0969
511bp
chromo6/Bm_scaf11
6993210bp
UniRef50_P49448 (71%/108)
Cluster: Glutamate dehydrogenase 2, mitochondrial precursor; n=91; Eumetazoa|Rep: Glutamate dehydrogenase 2, mitochondrial precursor - Homo sapiens (Human)
GO:0004352 F glutamate dehydrogenase (NAD+) activity
GO:0004353 F glutamate dehydrogenase [NAD(P)+] activity
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0006520 P cellular amino acid metabolic process
GO:0006536 P glutamate metabolic process
GO:0016491 F oxidoreductase activity
309 br--0971
562bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q2F5W4 (55%/47)
Cluster: Sericotropin; n=4; Ditrysia|Rep: Sericotropin - Bombyx mori (Silk moth)
GO:0005549 F odorant binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016779 F nucleotidyltransferase activity
310 br--0973
501bp
chromo11/Bm_scaf24
5118123bp
UniRef50_Q13418 (75%/58)
Cluster: Integrin-linked protein kinase; n=23; Euteleostomi|Rep: Integrin-linked protein kinase - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0007155 P cell adhesion
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0016203 P muscle attachment
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
311 br--0974
570bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q01ZQ0 (41%/39)
Cluster: Putative uncharacterized protein precursor; n=1; Solibacter usitatus Ellin6076|Rep: Putative uncharacterized protein precursor - Solibacter usitatus (strain Ellin6076)
312 br--0979
614bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q4SPT1 (45%/46)
Cluster: Chromosome 7 SCAF14536, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7 SCAF14536, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0003714 F transcription corepressor activity
GO:0005737 C cytoplasm
GO:0006512 P obsolete ubiquitin cycle
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007264 P small GTPase mediated signal transduction
GO:0016874 F ligase activity
313 br--0980
644bp
unknown/Bm_scaf148
369198bp
UniRef50_UPI00006CAA4C (26%/86)
Cluster: hypothetical protein TTHERM_00329950; n=1; Tetrahymena thermophila SB210|Rep: hypothetical protein TTHERM_00329950 - Tetrahymena thermophila SB210
314 br--0983
580bp
chromo1/Bm_scaf23
5097954bp
UniRef50_A5KC96 (34%/44)
Cluster: Putative uncharacterized protein; n=1; Plasmodium vivax|Rep: Putative uncharacterized protein - Plasmodium vivax
315 br--0984
561bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q4FH11 (57%/106)
Cluster: Cytochrome c oxidase subunit I; n=26; Bilateria|Rep: Cytochrome c oxidase subunit I - Samia cynthia ricini (Indian eri silkmoth)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
316 br--0985
520bp
unknown/Bm_scaf377
26808bp
UniRef50_Q8MRQ4 (37%/37)
Cluster: LMBR1 domain-containing protein 2 homolog; n=6; Endopterygota|Rep: LMBR1 domain-containing protein 2 homolog - Drosophila melanogaster (Fruit fly)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
317 br--0992
545bp
chromo7/Bm_scaf90
1464009bp
UniRef50_Q66KS0 (31%/45)
Cluster: MGC85503 protein; n=1; Xenopus laevis|Rep: MGC85503 protein - Xenopus laevis (African clawed frog)
GO:0008152 P metabolic process
GO:0016779 F nucleotidyltransferase activity
318 br--0994
618bp
chromo20/Bm_scaf37
4206046bp
UniRef50_Q8N448 (43%/39)
Cluster: Ligand of Numb protein X 2; n=26; Euteleostomi|Rep: Ligand of Numb protein X 2 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0030165 F PDZ domain binding
GO:0046872 F metal ion binding
GO:0051260 P protein homooligomerization
319 br--1001
733bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI00015B5C7C (85%/56)
Cluster: PREDICTED: similar to ENSANGP00000022151; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000022151 - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
320 br--1002
720bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P25007 (68%/107)
Cluster: Peptidyl-prolyl cis-trans isomerase; n=16; cellular organisms|Rep: Peptidyl-prolyl cis-trans isomerase - Drosophila melanogaster (Fruit fly)
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0035071 P salivary gland cell autophagic cell death
GO:0042277 F peptide binding
GO:0048102 P autophagic cell death
GO:0005739 C mitochondrion
GO:0005624 C obsolete membrane fraction
321 br--1003
406bp
chromo24/Bm_scaf43
3469235bp
UniRef50_Q9Y221 (73%/83)
Cluster: 60S ribosome subunit biogenesis protein NIP7 homolog; n=18; Eumetazoa|Rep: 60S ribosome subunit biogenesis protein NIP7 homolog - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0042254 P ribosome biogenesis
322 br--1004
692bp
chromo8/Bm_scaf19
6098939bp
UniRef50_A3BY93 (69%/86)
Cluster: Enolase; n=90; root|Rep: Enolase - Oryza sativa subsp. japonica (Rice)
GO:0000015 C phosphopyruvate hydratase complex
GO:0000287 F magnesium ion binding
GO:0004634 F phosphopyruvate hydratase activity
GO:0006096 P glycolytic process
GO:0016829 F lyase activity
323 br--1005
583bp
chromo10/Bm_scaf10
7317751bp
UniRef50_Q9U6B8 (83%/90)
Cluster: Calcium release-activated calcium channel protein 1; n=17; Eumetazoa|Rep: Calcium release-activated calcium channel protein 1 - Drosophila melanogaster (Fruit fly)
GO:0004252 F serine-type endopeptidase activity
GO:0005216 F ion channel activity
GO:0005262 F calcium channel activity
GO:0005509 F calcium ion binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
324 br--1006
762bp
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000D56089 (42%/166)
Cluster: PREDICTED: similar to CG6349-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG6349-PA - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003889 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
325 br--1007
735bp
chromo7/Bm_scaf45
3364234bp
UniRef50_Q2F5W4 (98%/86)
Cluster: Sericotropin; n=4; Ditrysia|Rep: Sericotropin - Bombyx mori (Silk moth)
GO:0005549 F odorant binding
GO:0006810 P transport
326 br--1009
688bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q618V1 (34%/67)
Cluster: Putative uncharacterized protein CBG14482; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG14482 - Caenorhabditis briggsae
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
327 br--1010
457bp
chromo12/Bm_scaf110
1013275bp
UniRef50_Q7Q3X2 (55%/79)
Cluster: ENSANGP00000011718; n=4; Endopterygota|Rep: ENSANGP00000011718 - Anopheles gambiae str. PEST
GO:0007218 P neuropeptide signaling pathway
GO:0030141 C secretory granule
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
328 br--1011
764bp
chromo26/Bm_scaf25
4930657bp
UniRef50_Q9VY28 (52%/85)
Cluster: Probable mitochondrial 28S ribosomal protein S25; n=3; Endopterygota|Rep: Probable mitochondrial 28S ribosomal protein S25 - Drosophila melanogaster (Fruit fly)
GO:0005739 C mitochondrion
GO:0030529 C ribonucleoprotein complex
GO:0003735 F structural constituent of ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0006412 P translation
329 br--1012X
466bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q98S14 (30%/65)
Cluster: Putative uncharacterized protein orf201; n=1; Guillardia theta|Rep: Putative uncharacterized protein orf201 - Guillardia theta (Cryptomonas phi)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005215 F transporter activity
GO:0006810 P transport
330 br--1013
751bp
chromo7/Bm_scaf45
3364234bp
UniRef50_Q2F5W4 (97%/86)
Cluster: Sericotropin; n=4; Ditrysia|Rep: Sericotropin - Bombyx mori (Silk moth)
GO:0005549 F odorant binding
GO:0006810 P transport
previous next from show/1017

- SilkBase 1999-2023 -