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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG16891_3prime_partial:A_TrvaMG_comp27168_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016604 C nuclear body
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0042826 F histone deacetylase binding
GO:0044255 P cellular lipid metabolic process
GO:0047485 F protein N-terminus binding
GO:0072365 P obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter
GO:1903799 P negative regulation of production of miRNAs involved in gene silencing by miRNA
RNA-seq EntryA_TrvaMG_comp27168_c0_seq1
Sequence
(Amino Acid)
MAQYSQRTQPMHRPGQSDHGHSGGALSYGGKPAGAVVAPPRPPPTTPYAPQPYPPAQLRL
HQPGYGSAALSYRDGSYGRSGGAVGEYRGGGRMSLLGTTYLPPPAPATLHPPPADPPPFK
KIRLTAERAPITQLTHHLPLRVDTREPVNSYNTVDVLLSPNPTSEPSGEDQTLRTTKDVL
LKEISKVDREMALVENSLAKLKRKQEELQQSASKPAQTEEPEEAPSRHRSLAQCIYAENR
KKAASAHGQLDHLGPPVPYPLYNQPQDTEVYHENIRKHRLFRKRLIVHIRRIKAESEKRE
DLLADEYTKRAAEWARRVERIEQSQKRKAKDAKNREFFEKVFPELRKQREERERFHRLGA
RVKSEAELEELADGLHEQEHEDKKMRALTVVPPLRRDPLDTTPIYLDTNTLIPGRCLDMK
SEHKELQLRNIWSQAEREIFREKYLQHPKNFGTIASFLPRKNVRDCVRFYYLSKKCENYK
QLLRKPRQRRSTRNPQRTAVETDLPAGVTTRLQRSQGARCADVKEPVLEETAGVLIPEPS
AVPLPAGAAPQQTHGYASIRVELTRTPPLPPSPPPASSAPLAVTTASTILLTMAPMDSPS
SIPIPASSPPPTATVLELPATTTATVTETTVTITALTSAQDSPLPAVESPVPTPAPCVTP
TVVASPAPAPSPTPAVSIPSPASTPASTSPSIAATVSTSTSTLITTSPSATTVPSPASTV
VVSAVVTCSPSSTPTSVVVPAVITVAGLPSGGGASGPSSAPPTPQPANPPTPTQPPPTPE
AAVIERIGTPSTSVTPTTTTTTTTMTTTSSNCAVCSAPGATRTVSRSRAAHYGLKEESVG
SRVCEACHCRCVRSRYTRCPVPTCPGPRVRAKRLRHLPPRWHDLAIELKRPLMDEFQIPS
ELSKCCLSCLKRITRRLESAGPGCEPSEDEFRGWLRDHGTAWDKIAALSGRTPATLKAYY
FTYRKKLQLDSIVSGGSSTTSATGRSSSEESGSSESEGGVGSPPPAALPPAPRTDAAAPR
RTRKDEYDSSATETADEENDAPSVKVLPSTSMPTPVCSTPSSTTSTASPLTPTIPCSAVS
STPPTSIATSVLTSVPGATVLTPVSGATVLTPVSGASVLTPVTGASVLTSGASVLSAASG
PSVLSNTAQAIRSAVSTPQTVRDVVLNIIEFSLSREAQPPPIKTHHLKTPSTTPSRSSND
SLATLTVVNSSHAGHSPSPRSPRPTATITPVGAAPGGQVGNQGDKDGVVVLIEPRPDSLL
DLTVKRTDRRPEHAFPTPNKSNTYRNSEYAQYARERESPNQYNTKKAVANSSVRVLKNVT
NPKGSITLGTPVESRYEPKSGSITAGTPVHPHLHDKKFDQYYKRRSPGGPAYYATQPRPQ
SPSFSQSGSSYGRNPHVLEQRSIIMADFITSQQMHAGARRERADTDYPPAHPQAQHQSQI
PAVLPTSHPAAHPAQHSAGHPAQHYSRREPVSVIQRHTAGHGLYPHHPPPGHEAFTSLVN
VASAATALPVPGGEPKPDAKTQQHHSTHDVRLRDLGMSQKYHSIPQYQVIDRRTKQQQYN
MERDIQIAMQQRRESDRPLERHESHSAHPQLIHERHLLPHVQNVSSQESRLVTSGTYSTA
KHRSQTPHYLDARLTKSEIRAAVSSALASGAAAGVASAAGVAGAAQDRSGKLTAASLIDA
IITHQINQTSDQRFPQQGVRECDNGGVVGVAGVGVAGVAGLERGHGGAGAGVEDLAHKTS
FKLGDLASNIITRDYLAPSAALLQQHNSRFPSVSSSESYNPSVSSHLSVSSSMDEWKRRD
ASNRVPYLEPVSPPDNHHSNHHVNRSSSNTSSSVVSSVAGGGGGGGGSGGGSSSGGAA
(618 a.a.)

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