SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG16642_5prime_partial:A_TrvaMG_comp27145_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
RNA-seq EntryA_TrvaMG_comp27145_c0_seq3
Sequence
(Amino Acid)
DDESTTVDPARLISVLRDFMEKSNLAEYEVRLDLLFVYHCLLVHKKSDPKRDELLSILWN
MHNYYAQFSGQVAACIKDKRAPIEKKLRDFVKICSWDRDLSYWSVKDTVEKAHKALHKHT
KEFEKVLNESVISCLVDSSSDVTSDHVGIWDRPKRATTAAPTGGAYMIDPQLYIVSARNV
KKYIDQAEEPSKVVPEGSLLAKTTSLLNKAKTLCKDTIANTGYPSLVQALDDFVTTIIET
NTHLGSLEVDTSLPKDKQKSQAKNIIQQKRKALADLFKYLAKLGLNYRTGLVILSASDQL
YDFTIPPVDLDAAMGYLKSRRCDASLSLLWSGCEKYFQKNIARHQFLTAALLSPHEDLGM
QNIERIKGFAAQLLKLTNTQKKSISKYSRLLCDLRTVATNLTSAVDIDVTNTLYQRHLLT
RLKDQLNIILECYSNSSISLEQFYLVLKSCPEKTLRGEQEPEFDSVIADSKIVKCFKHSD
EWNELSKKIKTLITKVNNQKAMLLKLSTTLPKKIGQSTEHPLISQTLIDAIKESDESLSD
MIHEINSILNDHQLLLKLDIDGFVWEHPVLRSLRDLVSYLSKKQDKICEYDDMDNYGKTT
ENVSTEMFINQTEDLIATMLLIIQSVYKKHLTSNLSESTEVINAIDEFIDNDKKEETKDI
VEDKHLKELLQDKLSDDSKMLQLETLISKASSLLNNYVNSLSEANIEEMKPILMRSLPIL
EQTMHFVQYFVTQKVSVHRVSCKMLSVLLKIFSDLSSKGFCKPSDLEMDEGEGEGGPGKL
TGGVGLGEGEGQKDISEQIENQDQLDDAQRPGEEKKEEDRDCKEEEKGVNMTDDFDSHLQ
DVDKKDNDSDQEDDDNDADKQMGDTDNAAEKLDQQIWGSEHEEDVEDEGKKDKDEKGKGE
STGEKEMGAKDEEQGADDGAEGKERKQKKDINEMDEPEVDDDHVDPYHGNAPQYPEPEDF
ELPENMDVDGEEPADKDGETETENPFEIDVMKEMPEEPKDDKDEKQDNNNGLDVSSDEED
GEQNEQQNNGENETEVEDKDKEDPTQENKDEALDEKQEDETKEDGQTESSEPIPEEKPEE
QEQNEPLPQNDDKMNEDDVQEKGPDANPETNPSNDEAAEQKAENAEMDRGTSDNVETNSE
QTKDEESAPFEQAQEQVGEDKQSMGRSELDKSDKGHRGEKQVAKQADRTNEQRNKHENKP
GKTDEERVLGDITEKKNKQMQTLNVERDEDNAQDGGDDNDGEKDADAYQHVKQAKKDDLQ
ALDAATKEQAEEQPVIQKDEDNGEQLKEDEQVPMDVDDEEIQMEKSEELKPEKIREGTEK
DKDKSGNKKEGGEEPTGETGMEVEGENIVTSTVARGIDTSYHTRLDQESVDPEEMSVEQY
MGIREWLTRAPAPGVPSTAVWRALWRDSAASARALCERLRLVLEPTGRSRRAGDFRTGRA
INMRRVIPYIASHFRKDRIWLRRTKPAKREYKIAIAVDDSSSMSDNRSKELAFESLALVS
QALNLLESGDLAVLSFGEKPNLLHSFNEQFSEHSGSKILEQLLFEQNKTRIAQLLDFCTV
LFEEQSIKTDALNAKLLVIVSDGRGIFSEGETRVLQSVRRARQQGIFLVYVIIDNPDNKD
SIMDIRRPILDPTTNSLVRFESYLDSFPFPFYLILRDMSALPNVLGDALRQWFELAANVS
*(559 a.a.)

- SilkBase 1999-2023 -