SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG15456_complete:A_TrvaMG_comp26996_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000243 C commitment complex
GO:0000395 P mRNA 5'-splice site recognition
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
RNA-seq EntryA_TrvaMG_comp26996_c1_seq3
Sequence
(Amino Acid)
MEDETNSDIQKTSENPMDTDEGPLLNENSNGLSHILTEGEFNSVDAAVDESSTSNQCFLN
AVELSEGSAGDYLENNGPRFSTDSFDIGDNAVTFLNDSLNCVLNEDNSIQSDSASHKAVL
DTDSRQSESQPAALGTNENSDNDNLFTIGLNRVTTETDCDIHDQQQSENNIYLDNDSKLE
LIDKPFEEIIGNSEVIESTPQSTDNNDCLEVPNEHILSTEIKNVIGQSEPQSMETDEQCN
EEVEKTEENNEALKETPNRVGGAEETEVVSEDELPEVQKPSIKDAENVSDDELPGPKPAE
LPADTEVVSEDELPSSKKESRKRKPDEEKSNYDPGSPTSEGESANKKQAVAKNGESKPVP
AEKRTSIDEKPKPKVLPELEKYWKVVNDDPTDFTGWTYLLQYVDQESDVDAAREAYDAFL
SHYPYCYGYWRKFSDYEKRKGSKKKCYEVLERGLKAIPLSVDLWIHYLNHVKTTRTEDHA
FIRSQYERAIDACGLEFRSDRLWESYIKWEAENGSALNVTNIYDRLLATPTLGYTSHFDN
FQEHVMSEPVSGVVSSEELIRLRGEVRDAVGSTPALDLPPGEDEPLDHIASEEEAQAIKE
RIVAARRKIHKTTGEEVASRWTYEEGIKRPYFHVKPLERCQLKNWKAYLEWEKQHGSFKR
ALVLHERCLIACALYEEFWMKLIKFLEERAEQDPEAIAIGREVFERACTVHHLDKPELHL
HWAHFEEVQGNTAKAAEILDRIEKTCPNLVQIQYRRVNLERRRGDYDKCSQLYETYIAGA
KNKSIASALAIKYARFLQHVRQQHAAARTVLDEAITKDPLNSRLHLQRLDLAINTPGIAY
EELDELAQSYGKQEGADPEESARMAARRRDLAEELGDAAHARLAHAHARSLAKHLRKRTR
KEKHDPPPPPASTEVKKKESATTGSNTVATTSANYYAPAGSAPTYEQSYTQPYQPPWGYQ
QPPGPYQHHPHAWPQYPNYY
*(326 a.a.)

- SilkBase 1999-2023 -