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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG15252_3prime_partial:A_TrvaMG_comp26958_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0007419 P ventral cord development
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_TrvaMG_comp26958_c0_seq3
Sequence
(Amino Acid)
MADAAARQLQYEYKANSNLVLQADVRLIERRGRDEATGEVLSLSGKLIGTRMGDRAQRTK
PDKAEERKAKRQKRDEASYELSKSKSSRVAWADDAPGVLYRPRAQHTRHTYELLLAFMQS
SLGDQPRDILCGACDEVLLVLKNDKLKDLEKKKEIEMLLGTIADERFALLVNLGKKITDF
NMAAASEGNTEIDETYGINVQFEESSEEDDEDAYGEVREEERDDAEGSENEKEKESSGEE
DSDAEAKKNAIHTNLSEEQAHKRHSQTLHPMDIDAYWLQRRLSRHFPDAMLSQAKSSEVL
KALAEAADDRDLENRLVLLLGYDCFDFVKILNKYRFIILYCTKLASSQSESERTSIRDEM
SRQPHLQKILAQLETGNGDDEKTDTHSEAPRKKHKSDPDLAEGSGQVSGARKAVHLEELV
FAAGSHFMANKRCQLPPGSFRKQRKGYEEVHVPALKPKPFEENETLTPIEKLPKYVQPAF
EGFKTLNRIQSRICKPALETDENLLVCAPTGAGKTNVALLCILREVGKHVNEDGTVNVND
FKMIYVAPMRSLVQEMVGNFSKRLSVYNMKVSELTGDHQLTREQIEATQLIVCTPEKWDI
ITRKGGERSFTNLVRLIIIDEVHLLHDERGPVLEALVARTLRTVEQTREEVRLVGLSATL
PNYTDVATFLRVRPEKGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKIMEH
AGKNQILVFVHSRKETGKTARAIRDMCLEKDTLGHFLREGSASMEVLRTEAEQVKNPELR
ELLPYSFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIVKGTQVYC
PEKGRWTELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLIS
KLPDMLNAEIVLGSVQSVRDAVTWLGYTYLYIRMLRQPALYGVSPDKMQEDNLLELHRAD
LVHTAASLLDKAGLIKYEKKSGHFQPTELGRIASHFYCTYETMQSYNQLLKPTLGEIELF
RVFSLSAEFKHIAVREEEKLELHKLMERVPIPIKESIEEPSAKINVLLQAYISQLKLEGF
ALMSDMVYVTQSACRLLRAIFEIVLYRGWAQLVDKTLALCKMVDRRMWQSMSPLRQFKKM
PEEVIKKLEKKNFPWEKLYELGPNEIGELVRAPKLGKMLHKYVHQFPKLELATHIQPITR
STLRVELTITPDFHWDEKIHGQSEAFWILVEDVDSEVILHHEYFLLKQKYCKDEHQVKLF
VPVFEPLPPQYFLRVVSDRWIAAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALRNA
KYEELYNETFPQFNPVQTQVFNAVYNTDDNVFVGAPSGSGKTLIAELALLRMLSHNPTGR
AVYLVPKDALADLVFAHTYHKYGTNFNLKVVQLTGETATDHKLLNKGQIIITTADKWDIL
SRRWKVRKSVQSVSLLIVDALQLLGGEEGPVLEVVCSRMRYIASQTGKPIRIVALSLPLA
DARDVAQWLGCNANATFNFHPSVRPLPLELHIQGFNISHAPTRLAAMTKPIFNAIRRHAG
TRPCAVFVGSRRAARLLAADLLALAAARATPTAFLHATRELLTPFLDTVQDKMLKETLSA
GVAYLHAGVSSADRRVVQQLVECGAAQLCVVAAELAWSLAAHVHTVIIADTCTYNGKMHS
YEQYPITTVLQMIGRACRPLEDDHSVAVLMCASHHKTFFTKLLNDCLPLESHLDHRLHDH
MNAEIVTKTIENKQDAVDYLTWTFVYRRLTQNPNYYNLQGVTHRHLSDHLSELVESTLTD
LEQSKCIAI
(602 a.a.)

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