SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG13953_complete:A_TrvaMG_comp26750_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_TrvaMG_comp26750_c1_seq3
Sequence
(Amino Acid)
MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKILELLRPDPNTGKVHTLMKVEIFG
VVRSIMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVADLTGEDT
PQVYLACGRGSRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCMALGSVAVGEQ
RAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIVDQPFESGAKSTLHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFVPLEYTPRKF
IINSENNHIIVLETDHNAYTEDMKKHRRIQMAQEMREAAAGGAPEEQQLANEMADAFLSD
TLPENIFSSPKAGPGMWASQIRVVDMGIGGGQPNTLFKVPLEQNEAAVSLCIVRWMAHGE
HAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVHKTPVDEYPGALAAFNGKL
LVGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVSDVQESVFCVKHKKREN
QLIIFADDTNPRWITNSCVLDYDTIAVADKFGNVAIMRLPQSVSDDVDEDPTGNKALWDR
GLLNGASQKGDIVVNFHIGETITSLQRATLIPGGSEALLYATVSGSLGVLLPFTSREDHD
FFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPGKQKAIAGDLER
TPAEVSKKLEDIRTRYAF
*(405 a.a.)

- SilkBase 1999-2023 -