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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG13357_5prime_partial:A_TrvaMG_comp26611_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
RNA-seq EntryA_TrvaMG_comp26611_c1_seq1
Sequence
(Amino Acid)
ILASIARIPSSKHNLRSFQLNADQHIQMLTALVLQLVQCVVTLPETLCKSNEKDNKDQPP
ESSDSKKHVDKDLLMISKYEAAISVGGTFLTSFLNKCRSRSEEVDFRPLFENFVHDLLTT
VNKPEWPATELLLSLLGTMLVKYMSDKTMEMSVRVASLEYLGLVAARLRRDSVHSRGKLA
AMDAVVRDIRAEEEKDGNQAQSVTSGLDEDEERTEFLQRVLLDYLAINGQKDQAWNCARH
FYITQWYRDMVVQPKNTSPTKKPKNKSKRRHKDDSTEEESDADDDSDGGLKDSKSDRKHF
PSAIDSAEKFKTIERRKKFFIEKIRPFRYQGGTQVQVMQSYIDYSGAELISQYLASKRSF
SQSFDRYLRKILVILCENTIAIRTKAMKCLAMIVEADPSVLARPDMQIGVNRSFLDQSTA
VREAAVDLVGKFVLSRHDLIDKYYSMLSNRILDTGVSVRKRVIKILKDICIECPEFPKIP
EICVKMIRRVNDEEGIRKLVMEVFQNMWFSPCPNSSRPGALDMTAAAADPLTRKVLNITD
VVISSRDIGLEWFQQLLMSLFKPKEDKDDSTKIIYQPPKSLLVACQQIVDCLVESLLQLE
ETSTDGSGSSQRILACLSTLHLFAKIRPQLLVNHALTLQPYLSLKCQNQHEQQIMSTVAS
TLELVVPLMEHPSEVFLAQLEEDAVKLILQRGQLVIASCIACLAAIVNNLTHNYKLIRDV
FNKYHGILLQWKSSWQRNPEMTRSSHSRPHFRRSLFIVGLLLRYFDFTDAKVIEGLPLDI
KEQVYSTLMFFVGLEDEDFVSHTLKSLGSVCVRHYEFMLRPELKEFYHQLLTSDLAPIEM
KVDVLRNIEMYLQEEEQRMIRQDKEWSTRSKHENLKEMGDVSSGMASTVIQLYLKEILGS
SIHHSTVVRSAAMKVVQLVLAQGLVHPVQIVPYLISMSTDLEVTVSHTADKNLQEIDKKY
PGFIHMKAQLGIKLSYQLQKTLQSNSRDKNVIRGFRKKEQDDLPTALNGFLYSLLRNTRP
QRRALILSLLKQFDDVSTAPLDQMLYLADNLSYFPYQVQDEPLFIIHHIDIIISTSGSNL
LQLFREGLIKTSSGEKGGAEEEDEEEEDAEALWARVPHNTRALRDAMRQARGCLLLLVLK
QHLKQLYGFTDAKINQYSPSESAKVYEKAVSRRHAPIFEPKATILQLHEDDCDDELDERG
RRRLINDYLELKQLMLKFDPEEEDEEESAPPPAPAPRTHTTPALSHDMRCDNVAPEPGLV
ASPSNT
*(421 a.a.)

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