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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG12219_complete:A_TrvaMG_comp26337_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0034693 C U11/U12 snRNP
GO:0044822 F RNA binding
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_TrvaMG_comp26337_c1_seq2
Sequence
(Amino Acid)
MQTEEAGGSGAAAARLLDPQPKGNQQLPFMKPEDAQYFDKLLIDVDEDTLSPDELKERKI
MKLLLKIKNGTPPMCKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVID
RILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDI
DNIDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGC
AILPHLKSLVEIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRT
HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCG
TDGVEPQYIMDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDL
KDDNEQYRKMVMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTI
VNQLGKRVKPYLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVV
LYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCID
LVGRIADRGPEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATL
LNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEY
IGEMGKDYIYAVCPLLEDALMDRDLVHRQTACAAIKHMSLGVYGFGCEDALVHLLNHVWP
NIFETSPHLVQAFMDAVEGMRVALGPIKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQ
DALVAGYPRIQNDPNNHFIRYELDYML
*(288 a.a.)

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