SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG11961_3prime_partial:A_TrvaMG_comp26246_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
RNA-seq EntryA_TrvaMG_comp26246_c0_seq1
Sequence
(Amino Acid)
MMNEHFTTWGLKITQGQELTVDYDERTLYDMGFKDNQLVFVSVGVGGRSGWGEWALPPSH
ARYPTLLLLEPACFHQLFSLMQALGQMKEPGPNGEHIAHTKAQLLSRRVWDILQAVPLNP
TLLEAFQNPTESKLPELLDPTSPQKLMYSLHIVDKLSSTSPVPNSKETPAAKSEEENVTV
ETWNDVFIKKGGLRLLYDIMMSGVLQRNDDSEWRQDCLALLLQLLCRIGTLPSSDPSQTP
KLHPTLLSLMSVEETTERLISILSEAATLKEPTTYKTGFWGRAQVVQHAMRMCVWWARGG
GDPVSLAWALRKTAPRLLLDDADPAVRREAGSALYRLCAGAACVQAPVLQLLLLHLPRAA
DMRPHHHHTHHHHHEMGHHHAEEGKEPYGPACRDYFWLVCRLIDGLPEDYFKEGATSDDS
GAPDLNELCEQIRASLEKREILERKTDPCTPDDGLYGQLSLLTHLLKHPLRFKTSEQGTR
TLEMIFGFLFDVPNPENRNLPKCKSQKSRAAAYDLLVELVKGAPDNYMVLHHKLMEHHKP
GGAASYPWDYWPAEESRSECGYVGLTNLGATCYMASCMQHLYMMPAARAALLTADPAASR
HSATLSEMQRMFAYLMESERKAYNPRSFCKVYQMDHQPLNTGEQKDMAEFFIDLVSKLEE
MTPELKKLVKTLFCGVLSNNVVSLDCPHVSRTLEEFYTVRCQVADMRNLHQSLDEVTVKD
TLEGDNCYTCSQCAAKVRAEKRACFKKLPRILCFNTMRYTFNMLTMLKEKVNTHFSFPMR
LDMSGYVEKHLMPAQYQEEKRKSAELRKEGEASPNGDVEDNSEFQEHYEYELIGVTVHTG
TADGGHYYSFIRDREHDHHDRWLLFNDAEVKPFDPAHIAAECFGGEMTSKTYDSVTDKFM
DFSFEKTNSAYMLFYEWSPPKTQRGSDCGQQEEAQSSTAEELCPSSAVERRSSDTTATIK
LPPDLLKWIWDDNMQFLHDKNIFQHAYFTFMGQMCSSVPQTLITLHPEITEVAARLSTSF
FIETFIHAKEKPTMVSWVELVTKQYNASAAASEWFLGHMADDTWWPMQVLIKCPNQMVRQ
MFQRLCMHVIQRLRSSHCGLYLQGVENEEDSSKLGEASCVTRFIRMLLSLMENGARAHLR
HLTEYFSLLYEFSKMGEEEGKFLLRINAISSMVNFYLGQNGNSLDSGPEEAGGSGATDSG
GDKLRPAALDKMVALVGGLVERSRDGGGQLALLEPDAKALLHAKGFPFIYQQTRDCLNLQ
QTRSLIFALCRFNEPLAQKIVATIFQAIAKHSESCGPFFKLLTLLVEGSGGGAGGTGGLP
CFTQLVLGRLWECGEVCPHAALEWLALQVPRNKAAHAWALRTAERWVEP
(455 a.a.)

- SilkBase 1999-2023 -