SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG11230_complete:A_TrvaMG_comp26057_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_TrvaMG_comp26057_c1_seq2
Sequence
(Amino Acid)
MSNRRPQPGRRADFGRNDRPKSYTRSNVSPWQSGGPGERLPNLLPLAGGSTEATLALASN
IINLLQPRQNAVPSLLDMPIRRDFGPSMGRYDRGYEPNRMGNHNFRRTGNYNRAGERINT
NRKPFRPNDGQRQHKNSPKKETDSKAKPVKESEKEPEEKPSETEKSEVEKKETSEEDKQD
VPKTRYDDINAKLLKCHICHKSMWDGRSFENHLSGRAHAIMMQKTVESYALTADTMRQEY
KIREMKRTRKTGQQPARDFYCAMCDMYAGNGAAHRTTVGHRKLKKYLHPFCNTCHKEMPT
RIELDEHRLTAEHLRAIQDKQDVLTKPKPEMLMISTLGMEQSYLCERRQRRPRREDGQDD
KKDDGEKTDGDGDGKVKPEDDDQEMKEVGEEKSDDKPIDDEKVILDFKEDDDLSHVTADM
FPGYSTERGVGESFLTEFRCVQCKLCRKLLDTPETAQVHLKTWRHHVFFVKMLSEKTGLK
TGNQQSESYEKNGKRPADRTDRTDDSGNFKRRRGSTDNDVHDRDYHDEHDDDQDNDNTND
MTDGNDDNLDDSMPNNDELEDWEQSVDEILEDEKKNHDEQAEPEVKSEPEPEPKPVEPTP
EVKEEPEVVEKVEEPPKAKTPPQTKQVINDKPKPSPRGRGRGRGRARGRY
*(216 a.a.)

- SilkBase 1999-2023 -