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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG10842_5prime_partial:A_TrvaMG_comp25960_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
GO:0016020 C membrane
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0045943 P positive regulation of transcription by RNA polymerase I
RNA-seq EntryA_TrvaMG_comp25960_c1_seq1
Sequence
(Amino Acid)
KLLCFKPSIAHKVGDTYLFENLNHTNPSLRIDAVKYIGKEFGALKLQNPDFVKESILQRL
SDDNIDVVIAALNISSESLAEVLSEDDISDAFVKIVSRKSKKGTKAIKKAVVKFCALDLL
PINQDTVLAILPLLFPQDEKELEISTQILKSRWGQKFASTNKALKKISNISNHNKLNKEL
FQVFFVDNKVDLGDILDEHNLDKTNTLNICFYMLLKTCTFKKQEVEEISDLLNLLLESVE
CRSIVHSTDEVPFSAQIMPEFIVKAKENKMLFEVLKYIFGKVIEDVNIKDVAKPWCNMLR
TTDMILVRRLYEICVTGCAIPGYGENYVELLQKLLNKFFSSPQDKFNFIANFACGHILYA
TDPKDVISPELQIRSIKLLTNFLVAQNGANWLYDSDVVILVILFNFNNPIAAIRHCIANF
TEKLLRDEPDKKLLYVQLLQELLAHQSELLLDPNQISQVLKTIFTQKDQHKKLFRRNCLL
RLTGLLNEKTPSYIKSAFLKIISQLDNASTFPLITPCLSPFTKRLKNKEDKKLTFDVYES
NIFRTVFSLINESTVTTFSNDQVWDHIELSLKEYRECIFEDQSFICPAVLIMRRLTEEVF
AKVPGEKRKQLVHLISSAGAVSNNPKISSVASKVMKRVQLSFEDFKPILNGMLSAVDPAD
VSQKKKTHTMSMFSYQLAETDEWKLGVALLEYVQSKKKMNLDITFVSILFQVLKKCLRFE
EQSYVEYTKQLILSSLWYYCKKYVNDKDADELKSLKNVFDVDLVVQCIRGTQNPQTHHHA
LMLMSHAAYMLPEQVLNRSMDIFTFIGSSVLRHDDAYSFQIITKIIESLIPILVKLDKSI
EDHTEKELQQLQKRVVPVLRIFASVVLDVPEHRRLPLFKKLLDTLGPSQFLWVFLALLLE
THIVNFNESKKKDKRQSRTLADREQPLNRLDFGQSVVLEFPPEVCLDNFIKLILYIKSLP
LQKDEESMDTEIDPSEIFSVNGHTSVQLRHFKYVIITFMNTCLASSRFIHHCSQATKPKE
METHYKTIIVNILTFIQSISKVSDEKTAKYWRVMLHHSYDLLDHTNNLLSSQMFLGVVKG
LLKYPLQTVRRKSMELLNTKIQNTPEIFADVDRELLHSLLPELLEAVKSVDKKDDTLTEN
AAQELELSQQTALLSLKLMTRMLAAEDPEPFKSVLEVVTEYTCNQNISGNVMASIVLCLA
ELCSNLKAHSLVSLRKFMPALIKVLKKQRKAETPELILLSTVTAIAKIVESVPLFLSPYL
QKILYEYSIMLAKWQAADQECVKVSGIVNKLSNIRKKIAESIPPRVLIPVVSETHQLLLE
KEKFDAIGPVMSVLADSFANVTPADFTALQQDLTSFFLTALQLRSDAVEKNVDSDIIDKA
EDEVVNALVSLVLKLSESSFRPLYFKIYDWAIRTNVEGQKDRTITFYRLSSAIAEKLKGL
FVLFSGHFIKNAADLLDNCNNCKTEHLYFENDDKCQILVEYIIKTLYIVFLYDSQQFVNK
SRFETLMQPVVDQLENTVGGISSLKTRAIKHIIPCISQFAVATADDSLWKLLNYQVLLKT
RHNDAEIRLTALDCLVAMATQLGSSWLPLLAESVPFLAELLEDGDQRIETCTKDAIRKLE
QILGEPLEKYF
*(543 a.a.)

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