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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaMG10841_3prime_partial:A_TrvaMG_comp25960_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0009267 P cellular response to starvation
GO:0022008 P neurogenesis
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0045943 P positive regulation of transcription by RNA polymerase I
RNA-seq EntryA_TrvaMG_comp25960_c0_seq1
Sequence
(Amino Acid)
MAATSLSQQLEKLKAPQSSIYRESTKQVSLLFDPSEAALKDRETFHEIGLSGLQELIALS
PDFSIYQETLFSISSKDFERAVQSKEVNQNLDQNIEKFLLQLSPYFLLTSAHKALEWLVN
RYHVHEYNQDAMMALILPYHSTMIFVRCIQLMRLKTATNKWSWLIPMQKNGVPLGNQVLY
NQCASNIGTLQFIGRMVLNYIQEYKERATQLNTIYAFFCQVAVGTISSVKNVSERIITAL
LPTLVKGIESQIVDFRASCYITIGYLLTKTKLKESTLSQILDRLLTTEFDPSYDVVLLIV
MLYEHQTHVTEMSDAIFNVSVDMMHNFCGHIKVLVEKKTNIKPFVMAFLRKVLPLVQTDI
EEFKTYSPLLDVLIQEVDLKNQDPEKIIMCILEAYQPTTDIQEADEDGNESDIEIIDDDS
CSSKIVSWYALLLKNVERQYPDAFDKVVTAIMSSNSNIPAKRQRQLSKLLCFK
(156 a.a.)

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