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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG28642_3prime_partial:A_TrvaFAMAMG_TR23509c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(XVIII)_chain_isoform_X4_[Bombyx_mori]
Ontology
GO:0003431 P growth plate cartilage chondrocyte development
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005583 C fibrillar collagen trimer
GO:0030198 P extracellular matrix organization
GO:0046872 F metal ion binding
RNA-seq EntryA_TrvaFAMAMG_TR23509c0_g1_i3
Sequence
(Amino Acid)
MERFRYTSLPFLLLVTACCATDGMFGSSMYQNDVPEYDLLHAIGVPFSNPKTQYFDEGLD
GFPAYGLMPGSDIKSPYRLFMPEKLYSEFSITATVRPANKDGGFLFSVVNPLETVVQLGV
QLIPSGPGLMNISLLYTDANVYALSQTIASFVVPTFAKKWSRFALKVSLENVTLYLNCHE
FDTVVVKRNPMELVFDSASTLYVGQAGPLIRGAFHGAFQELKLYGSPTQAEVQCINTFED
IDKGAEGDEIDIDNFLVDQEEDGEGSGRYGTIPPFPPPPPGLDGYSLRLRGDKGDRGSRG
PPGESIRGPPGPPGPPGPPGPPGSTTESSGFGDDQIFGENYSSLGQCGCNASTILSLVQT
APELRGPPGPPGMVGADGRTGPPGMPGQPGVIGDRGPMGPRGDKGDRGDSGPRGHEGQPG
PKGEAGVDGRPGTPGPPGPPGPPGTPDYNNFESNWKPRQIYKESLMGTYGSAIGRPGAPG
PKGDSGQPGPIGPQGERGFPGQKGERGQAGVTGTKGDRGHPGSPGDRGIKGDRGNPGLDG
RPGIPGANGRPADKGEKGERGEPGPPGPPTSGVFNGDSEFMVAGSQLESVKGDKGEKGEK
GTRGNDGPPGFPGKDGKPGERGDLGPSGLPGMAGPAGPHGPKGDRGERGPPGPISVASSG
TDIITVKGDKGDPGLRGRRGRPGPSGPRGIQGLQGIQGPPGPSGRPGDKGETGLPGWMNS
KGRPGTLGPPGVPGPVGPKGEKGDPGVNVLDVSMFKGEKGDRGFDGTPGLPGAQGPPGPP
GKSDSIQYIPGPPGPPGPPGTPGVSLVGPKGEPGAGYYGESTHGKETMFGRPTFISKSQL
TDDSYGQRTVPGAAVFQTTEEMLKLASSSPVGALAY
(291 a.a.)

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