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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG27754_5prime_partial:A_TrvaFAMAMG_TR23450c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_atrophin-1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001104 F transcription coregulator activity
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006298 P mismatch repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008263 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
GO:0009790 P embryo development
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016799 F hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0016925 P protein sumoylation
GO:0019104 F DNA N-glycosylase activity
GO:0030983 F mismatched DNA binding
GO:0032091 P negative regulation of protein binding
GO:0032183 F SUMO binding
GO:0035511 P oxidative DNA demethylation
GO:0035562 P negative regulation of chromatin binding
GO:0040029 P regulation of gene expression, epigenetic
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0045008 P depyrimidination
GO:0080111 P DNA demethylation
RNA-seq EntryA_TrvaFAMAMG_TR23450c0_g1_i2
Sequence
(Amino Acid)
ETSSKCEQQSASMIREEGDDKPKPPESQDDGYETSNSGEAARRKPSSAEGSPAPPPEPSP
PPDPPYEPMMRYPQPEPEPYRHFEQPAPPLAQPEPQYFPFPKYNEPYSFKREDMPYDMSQ
HHQAHQHQPHQPHPQYAPPQKRDDDIYNGIKRECEDPYSFVEEETMCAMLQQPQHHLQQM
HPDHHPHMMHPQQMLLNQPKKRGRKKKIKDENGMEIKVEPGMDGLIPRPVKERKKHDRFN
GMSEEEVSRRTLPDHLAENLDIIIIGINPGLFAAYKGHHYAGPGNHFWKCLYLSGLTREQ
MSADEDYKLLNFGIGFTNMVPRPTKGSADLTRREIKEGSAVLLEKLQTFRPKVAVFNGKL
IYEVFSGKKDFCFGKQPDTIAGTNTYMWVMPSSSARCAQLPRAADKVPFYAALKKFRDYL
NGLIAHIDESELVFPDTTSRRPQEELEIRRLTMEPEPGDTIILEDGTEVPLKKKRGRPKK
VKLENGETAPPIPRAPRQPRPAPVLDPNGEQPPKKKRGRPKKIRPEEQQFLLQQQQQQQE
EQTIHGNVCTQQSSASQLLQTPLPSMQSLPHDQYSMSDFPQQMSQLYQQQIADNATGYFQ
PQGQQAQPASGMDSPLDVTGTLAGMSRGYSSPGNNSGAGYCASPRAVYASPVSQSQGYSE
GGSVFPGSPGGYSPASRAAFAARSPLYAHSPAHQPYLPHQGQQPSPVPQSRFSQSPHPHH
PLPYSRSPVPQNGTRPYSRSPAPSGTVGGTTPFPAASPAGGYTPSPAHTPYSHHSSPAPP
SRTPTYTDSHHFAHQSGGSSGSGAFGGELSSEIGAAISSPGPVSPGMAALDFEPPAASPP
PEHSDDSLTDYNKPSAGSDMSPAAVSSAAYGGALYDGEQRLQYGHAMTHSPASQDKQDHY
HYQEQGSGVSESPRLDQMHQHQSLYQSNFNRSTPPSGEGSFSPLAGAAFRPPEHPHTPHT
PHTPHTPHTPLHHQPGSPSDYSGTVKPKSQDVASKSLSGLESLVDQIPSIAEGPGAAAGV
AGAGGGPPGTVGGTEQPAPAPVPTLPEYAPALYGPYGAYGSAAYGNNGYGGPFVGYGGGW
GAAVMRPAPGYLSEWQYPYSAPAYPYNAPYYGPPPAHHQQAHYLSAPQLIDLHKNGEHSA
GVPAVPSVPSVGFGGFC
*(385 a.a.)

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