SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG24597_complete:A_TrvaFAMAMG_TR21626c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP16_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
RNA-seq EntryA_TrvaFAMAMG_TR21626c0_g1_i1
Sequence
(Amino Acid)
MSDPEENVHRLEGTSGDAPGGLIIKKKDKPPDIQFAKPSLLGLDKLAAAKRKQNRLISFQ
TEDNEDEGTSAENEVKERKYRKHNEETPTYTGGISEQARERIIERMQKKEKQAKEKGVHN
STQEEKKTRSREDDDYYRRYDRRDRRKDDYRRDRDRGRRDRDEDKRERDRYDRDRRDRDS
ERSSSRRSYYNPKFKDEPRTPSISALKPTEKTAWDDDDDDPKSTVRKSSWDFPTPLTRDY
DQRSERGNRTMRDYKGRAYENTPRATPHKFASSRRLVDVDDPDWQEAEKKLDRDWYNMGE
GEADESDPFGNTSEEYIARKEEQIEKRRNRKVSAQRQQIDKDNDLWERNRMLTSGVVHSI
NVNNDMDEENVDRVHLLVHNIVPPFLDGRIIFTKQPEPVIPVKDPTSDMAMNARKGSALV
KAFREQKERRKAQKKHWKLEGTKLGNIMGIQKEKEELEDGPTREAYKYAEHLDKEAQEPE
SKSDFVKKMTISEQRRYLPVFAVREELLQVIRENNVVIIVGETGSGKTTQLTQYLHEEGF
SKLGTIGCTQPRRVAAMSVAKRVSDEMHTKLGDEVGYAIRFEDCTSPNTVIKYMTDGILL
REGLREPDLDNYSAIIMDEAHERSLSTDMLFGLLREVVARRSDLKLIVTSATMDSTKFST
FFGNVPTFTIPGRTFPVETFFSKNPCEDYVDGAVKQALQIHLQPEEGDILIFMPGQEDIE
VTCEVLTERLTDLDNAPPLTVLPIYSQLPADLQAKIFQRAPPGQRKCIVATNIAETSLTV
DGIMYVIDCGYCKLKVYNPRIGMDALQIYPVSQANARQRAGRAGRTGPGKAYCLYTQRQY
SHELLASTVPEIQRTNLANTVLLLKSLGVEDLLAFHFMDPPPQDTILNSMYQLWILGALD
GTGALTALGRQMAEFPLDPAQCHMLIVSAEMGCSAEVLIIVSMLSVPSVFYRPQGREEEA
DAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQQLKDILQQ
QRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSP
DYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRKEAAVHLQRMEE
EMKEAEAKMAEDRKKKQEDVPVKQEIATPGLNTPRRTPQRLGL
*(393 a.a.)

- SilkBase 1999-2023 -