SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG24550_5prime_partial:A_TrvaFAMAMG_TR21618c1_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0006936 P muscle contraction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
RNA-seq EntryA_TrvaFAMAMG_TR21618c1_g1_i5
Sequence
(Amino Acid)
FSGHELILEEIQLEKDKYEKEKASLQTFIDEVDSSIEKKQDLEYDKKYEDMVLKLIDFAK
KDFIFKGFDPIIEQLKALSNVKIERKRKTVNIEDILNVYTHIDITKYTYEELCLLEKYYK
EIIRKYKHEYNNKENIKETPTYHKNVILNVNTTNNLVKKVKINGDKRSHRNLEIFDLTRT
YPEQYYANNWWTIYEDILKNREHQFGSLDNWWNFYEAILRKENTSEEELKRIRAVVEYRN
NLRKRPNSRMEEQLKMLDEVHNNRFREIEDVQEKKDESVMVTNVTSLLKTVKAVEDEHTR
GTRALESTIEAISQEIEVLMSPSPPKTTATPEDLIRCTRQMTVATARAVAAGNANKQDQL
TAAANLGRKTVVDLLVTCKAAAQTAETAELRSRSIEAGRAAAASYRALLSAVLRAVCGEA
AARQHFPELSRSVAHTVADIIATAELLKGSDWVDPDDPTVIAENELLGAAASIDAAAKKL
DSLRPRKPVKQEADETLNFDEMILEAAKSIIAATSALVRAASAAQRELIDQGLVSGRAAS
SSDDSAWSGGLVSAARLVAAAAHSLVEAANALVQGAATEERLISSARQVASSTAHLLVAC
KVKADPGAESTRRLQAAGAEVIRSTDNLVRAARDAITCDDERSLVLNRRMVGGIAQEIDA
RSEVLRIEKELEEARGRLTAIRQAKYKLRGDTDESDADQQPGYSSDASGPQRIRTPNSSF
ANTTYSPNSTYHSTHNQSSLLTTNNTFNTTHNSYGHNNSTSPVPPQSSQPTSPTFSSFRP
PPEAPKQNYEAFTTRTATEDSVLVKQLRLPEVRSAILVDDRIYYKREKPPPPPPRKVTLN
YETRMYDTPRPVNDFNSHTERQENTHYQYKQEKFDYDAPKTPLSPKFNARDLKFDDKPEP
IYSTLKKPSDGIGQTFSEHQKSTESIPGGTTHSEYSVKSESYQSYPKTEFSKTEYRQEVK
SPFTSTPKFDRTEYKNTSTDLVKAATPDYERISSPYGKEVHSYGGPNYMEETTTEVKEIP
NGTQKITTTKIYSSSPVNLTSTSTKYEPIRLDGIDEISKTFDNDSRYSTLDSRFNTLDSK
ISSDTSRSFMRPSEFQSSDYQTTTNITKVKKPDLSKEIDSLDKRMSKQTITSETIERKSV
MTSSHKSESSSTVTKKFGNF
*(386 a.a.)

- SilkBase 1999-2023 -