SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG18544_internal:A_TrvaFAMAMG_TR16258c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_balbiani_ring_protein_3-like_[Amyelois_transitella]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0017022 F myosin binding
GO:0032391 C photoreceptor connecting cilium
GO:0032421 C stereocilium bundle
GO:0035315 P hair cell differentiation
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0045494 P photoreceptor cell maintenance
GO:0048496 P maintenance of animal organ identity
GO:0050896 P response to stimulus
GO:0050953 P sensory perception of light stimulus
GO:0060113 P inner ear receptor cell differentiation
GO:0060171 C stereocilium membrane
GO:1990075 C periciliary membrane compartment
GO:1990696 C USH2 complex
RNA-seq EntryA_TrvaFAMAMG_TR16258c0_g1_i6
Sequence
(Amino Acid)
CVCQKDGKIVRCDDCQCDENGKCDKEECVSVPTEGKSCVCLCSDEKGDIKVCNDCVCKPA
VCEELKCDKKGCICVATDGKSCICVCQKDGKIVRCDDCQCDENEKCDKEECVSVPTEGKS
CVCLCSDEKGDNKVCNDCACKPTVCQELKCDKTECICVATDGKSCICVCQKDGKIVRCDD
CQCDENGKCDTEECVCVPTEGKSCVCLCSDDKGDIKVCNDCVCKPAVCEELKCDKKECIC
VATNGKSCICVCQKDGKIVRCDDCQCDENGKCD
(90 a.a.)

- SilkBase 1999-2023 -