SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG18026_complete:A_TrvaFAMAMG_TR15405c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Bre1_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0003730 F mRNA 3'-UTR binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0010390 P histone monoubiquitination
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0017075 F syntaxin-1 binding
GO:0019898 C extrinsic component of membrane
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0033503 C HULC complex
GO:0033523 P histone H2B ubiquitination
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043234 C protein-containing complex
GO:0043434 P response to peptide hormone
GO:0043679 C axon terminus
GO:0046872 F metal ion binding
GO:1900364 P negative regulation of mRNA polyadenylation
GO:1901800 P positive regulation of proteasomal protein catabolic process
GO:1902916 P positive regulation of protein polyubiquitination
GO:2001168 P positive regulation of histone H2B ubiquitination
RNA-seq EntryA_TrvaFAMAMG_TR15405c0_g1_i1
Sequence
(Amino Acid)
MSKRGADEGGNGSSQPPIKKVHFEPHLIGPVSTLEEMDIKVLQFQNKKLAQRIEQRHRCE
AELRARIEQLEKRQTQDDAVLCVVNRYWNLLNEDIRVLLQRFDAETADESENKNENEATT
SFLMQLSTWDKEELDAQLANRVQVSKRAVAKVLQAFDRLQQRNDKIWRAIKGDSEDGGAA
PSLDATVRAANEEVTAENRRLQGLCTALHEAHHAMTLRVAALHDSLNSRDTENAELKNQI
DDLQYELMKVRSRNDKLENHLAEAIEKLKSYHQSGVNTAPTAPAHSGAAAAKLEDIAAEL
EEQRELANNRLAELDRLHRQHRDTLKEVEKLKMDIRQLPESVIVETTEYKCLQSQFSVLY
NESMQMKTALDETRLQLQNAKNLHMRQIEMMESEELSRQKALRAEMIQLEDVLGQLRKEY
EMLRIEFEQNLAANEQTGPINREMRHLITSLQNHNQQLKGEVHRYKRKYKDTSQELNKAR
KEVEEANARSGERGDDKSLVVKKEEPDPEGEEGGCNSAGESKIPLSKDHGRAKLQEQEQI
IKELKQQLKKAVNEQKELKLLLDMYKGVSKEQRDKVQLMAAERKARQELEDHRQKAKMAQ
ESKRERRMADEDALRKIKQLEEQKYELQKQLSCARPNADTMHPFSRPFAGSPEEEALLNE
MEVTGQAFEDMQEQNSRLIQQLREKDDANFKLMSERIKANSLHKLLREEKQLLQEQVITR
DQQIESMGAVARRLEEKERLLQATLSAVEKELLLRQQAMEMHKRKAIESAQSAADLKLHL
EKYHAQMKEAQQVVAEKTSALEAEAYKTKRLHEELAILRRKAERMKKMEQAGSSMDEVLL
EEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYH
RLYLST
*(301 a.a.)

- SilkBase 1999-2023 -