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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG16835_complete:A_TrvaFAMAMG_TR13645c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_6_[Amyelois_transitella]
Ontology
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006403 P RNA localization
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0043021 F ribonucleoprotein complex binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0050681 F androgen receptor binding
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_TrvaFAMAMG_TR13645c1_g1_i1
Sequence
(Amino Acid)
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESSSSIDPGSGLASMMPGVVTPGMLTPSGDLDLRKIGQARNTLMT
VKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQTARNLIMKGCEVNPSSEELWLEAARLQPRDTARAVIAHAARNLPHS
VRIWVKAADLEQEPKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIT
SLSANGVEINREHWFKEAMEAEKSGAVSTCQAIIRSVIGHGIEPEDQKHTWMEDAEACAN
EGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLSKARASA
PTPRVMIKSAKLEWALNNLDVAIKLLEEAIKVFGDYAKLHMMKGQIEEQMGKDDDAHNTY
TQGLKKCPTSVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRNAS
AEIANAVMAKALQECPTAGRLWAEAIFMESRPQRKTKSVDALKKCEHDAHVLLAVSQLFW
TERKLNKCREWFNRTVKIDPDLGDAWAYFYKFELLHGNEQQQEDVKTRCRAAEPHHGENW
CKVSKDIVNWCFSTDQILLLVAKNLPVPT
*(309 a.a.)

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