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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG15323_5prime_partial:A_TrvaFAMAMG_TR12099c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(IV)_chain_[Papilio_xuthus]
Ontology
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005587 C collagen type IV trimer
GO:0005604 C basement membrane
GO:0007391 P dorsal closure
GO:0035848 P oviduct morphogenesis
GO:0055013 P cardiac muscle cell development
RNA-seq EntryA_TrvaFAMAMG_TR12099c0_g1_i1
Sequence
(Amino Acid)
RARTGFWRSALSAMALYVLWLVAALAPQLIGVNSQNNRYGEWNNAYSRNYPPSNWPPEEV
PDTERPYATNQYGLYNRNDIPSPPSGSNSEIGNNFAVYDPDTRQRTSTIVNRNCTAPGCC
VPKCFAEKGNRGFPGQAGPQGPHGLPGHEGAEGAQGPKGQKGQIGPQGLRGPKGDKGRTG
EKGFTGRMGIQGPPGDQGRPGIPGRDGCNGTDGVPGVPGSKGSQGPRGYAGSKGDKGDKG
EAAHVGRYPKGEKGEPGTDGMRGSPGLVGPQGPPGLEGPKGRTGPIGLPGPKGDKGTKGL
QGHSIQGDKGERGDKGDRGQSCSPTSTVDFDHNKGIHKQIQGDMGEKGDKGEPGRIGQKG
DTGPMGEPGLPGQMGIKGEKGLRGNPGERGRDGMYGAPGPMGSKGERGNDGLPGLSGIPG
GKGEPGRDGMPGVRGLKGVPGPPGGLSGSQGPPGPLGPRGYDGPQGPKGTDGRPGERGPT
GPMGSPGSQGEPGTPGIEGPAGHKGEKGEAGFDGQKGEPGPRGYDGNAGPVGPRGERGQD
GISIPGRKGNSGLPGLSGEKGQKGERGYTGLRGVPGNSTLGTPGTPGEIGLPGEKGDKGM
PGYDGMPGSTGPKGDTGGRCNECSPGTPGVKGDRGGDGATGPPGERGPVGPIGLTGERGA
DGMHGLPGSPGAPGDRGEDGPAGAPGDKGADANIPLSLVKGPKGDKGARGPEGPKGPKGE
VGRDGSKGEPGQIGMPGPKGNRGDKGQPGIDGIPGVDGIPGLPGLKGISIKGEKGLPGDR
GFKGSKGNPGDRGFKGQAGQCPVDVKDLTRGDRGAPGDNGPPGPQGESGEKGDMGFIGRQ
GQKGEVGPPGKQGPVGPRGFPGPRGDKGEEGGKGFAGTPGMDGPRGYPGNPGFKGNKGET
GPSVAGAPGIPGSPGQKGDAGPRGLPGIPGDDGPPGPIGLPGEKGDQGLTGKPGYPGPPG
QTGEPGPTGPPGVPGTPGLPGRVGLKGHQGLPGAPGRPGNIGLPGQKGDQGIQGPDGLKG
FPGTRGYPGIRGVSGAPGSQGEKGDKGDIGYQGQPGAPGPSGRPGPVGPIGPKGDKGFDG
APGIPGLPGLDGPVGDKGYTGPKGDKGEAGLAAEKGSKGEPGRPGAFGMDGRPGRDGDKG
DTGEQGIPGQGIPGLSGLKGDMGIRGLDGLPGQNGDKGNRGPPGPIGNKGESGIPGRPGQ
PGPPGLDGTPGEPGEIGLPGLDGEKGDKGELGFPGRDGLNGQKGDRGLPGLEGPIGPIGL
QGVKGDTGLPGLSIDIKGEKGEIGPSGIPGEPGQKGNQGPPGLQGLQGLKGDRGKEGEKG
ERGFEGRVGQKGDTGPIGPVGIPGLTIKGEKGLPGTNGKRGHVGNPGESGQKGEPGPPGI
AGQVGLPGIPGREGEKGQKGEQGNEGVAGPPGREGPTGLPGLPGITGQKGDRGEKGATGF
GAPGQKGDQGPSGIPGFSGEKGDKGDRGQDGIPGRPGPVGPMGIKGDRGYQGRPGLQGEQ
GMKGNKGQAAELVYGAKGEQGPRGLPGKDGLPGAPGIPGRPGSDGPQGEKGERGYPGATG
IPGPVGPPGIAGLQGERGDIGMQGNTGYPGEPGAPCVSQDFLTGILLVRHSQREVVPQCE
PGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSY
WLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNILWIGYSF
VMHTGAGGQGGGQALASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQF
NVPQRDTLKSGRLLERVSRCAVCIKNTT
*(608 a.a.)

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