SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG15186_complete:A_TrvaFAMAMG_TR12003c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dystroglycan_[Amyelois_transitella]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
RNA-seq EntryA_TrvaFAMAMG_TR12003c1_g1_i1
Sequence
(Amino Acid)
MGCTRYIACALLLLCPLALSKHDDDFAFENNEDFQVELTANHSDISKNGLRRLWGVPDTL
AYVGHLFRMEIPKEAFSARVVVYKVRCGNGRRLPSWLAVDTRHGIISGIPQNQDIGTHTF
TVTAFGTTKGFTATDSFTIEVKRATDKPHSKYGTCIGEENRLVLLIMVDGAFHKLVPRQR
IRALMQLANFMALDGDEFWMEPYKTETNPDTVLTGIGSSIRKRGDATTAIYLNVGCGNKL
WSRHKVLVAGLREQARDGTLEHVLRLPVIGWRLLALKHTYRTKRQSQLDGSGDMYDAEYD
GEDDDEDYGSGYEDIDDLNFGDGRRNDVGLPEVEQDHDVKITPYSESSSELNNITFVPVP
PKQIESITALPDYIPSTTEPEVQTVLIRASNELPPLSSEPPVVTSQSPEPTEPITTSSTT
STKTTTEAPTTTPTTTPVTTPVTTPVTTPVIVPVTTPTTSTTSTTQATTIPTTEATTTPA
PETTEEEVTKQESTATEGKSTIIGQTTETVTFAMPVNQPPILKHHMKKLAITAGKAFRYI
IPADLFTDQDGGNLTFTMYEAENVPLSKTSWIQFIPSGLEVYGLPLESHVSRWNFIVEAQ
NNAGLKARGPLDITVQQHKSGRTLNHRFIMNFQLTKPFNVIDWQIRALEGIVNLFRDTDM
DHLTVLNATQTDDMCEFVWTNDTLPRDAACPMDDIKRLMKIMESESEAGKPSEGLSRAMS
PALRVLGVRWEGLGVCSAPPATRAPDTYPPVTRNQVDHLTAAAGHLLLYKVPEDTFFDPE
DGGTRNLQLSLRYSDRTEIPPGHWLQFDAKNQEFYGLPTPTDEGSVSYQLIAEDSGKKSA
YDSLIVEVVKAPPIRPTVEFQMTLEYPFAKLAFVANNKRKVVEKLAALFGQKETDNIRIQ
SITNNPTTIIWYNTSLPMDRCPRAEIEQLRRMIIVDDRASRGAALRDNVDQIFDKDFKVM
SITLIPLGLCAEQNTKVSKVPPAVYPGAPNLQNSSTETAEQSYLVTFIIPAVVIVCMILL
AGVVACVLYRRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERADAEPVHKSPVIMREE
KPPLLPPAPDYRSSEDAPYRPPPPFAASRTPPRPKATPTYRKPPPYVPP
*(375 a.a.)

- SilkBase 1999-2023 -