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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG14122_complete:A_TrvaFAMAMG_TR11411c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_39_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
RNA-seq EntryA_TrvaFAMAMG_TR11411c0_g2_i1
Sequence
(Amino Acid)
MSEPVSGVVSSEELIRLRGEVRDAVGSTPALDLPPGEDEPLDHIASEEEAQAIKERIVAA
RRKIHKTTGEEVASRWTYEEGIKRPYFHVKPLERCQLKNWKAYLEWEKQHGSFKRALVLH
ERCLIACALYEEFWMKLIKFLEERAEQDPEAIAIGREVFERACTVHHLDKPELHLHWAHF
EEVQGNTAKAAEILDRIEKTCPNLVQIQYRRVNLERRRGDYDKCSQLYETYIAGAKNKSI
ASALAIKYARFLQHVRQQHAAARTVLDEAITKDPLNSRLHLQRLDLAINTPGIAYEELDE
LAQSYGKQEGADPEESARMAARRRDLAEELGDAAHARLAHAHARSLAKHLRKRTRKEKHD
PPPPPASTEVKKKESATTGSNTVATTSANYYAPAGSAPTYEQSYTQPYQPPWGYQQPPGP
YQHHPHAWPQYPNYY
*(144 a.a.)

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