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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG11902_5prime_partial:A_TrvaFAMAMG_TR10716c2_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
RNA-seq EntryA_TrvaFAMAMG_TR10716c2_g1_i4
Sequence
(Amino Acid)
NGDNTSGGQPDDRRDPYGGGSGSQYDPYGTGSGDSNTRRPPYDQPENGDNTSGGQPDDRR
DPYGGGSGSQYDPYGTGSGDSNTRRPPYNQPGSGDNTPDNGYGSRPENRPDDRRDPYGGG
SGSQYDPYGTGAGDSNTRRPPYDQPENGDNTSGGQPDDRRDPYGGGSGSQYDPYGTGAGD
SNTRRPSYNQPGSGDNTSGGGYGSQTGGQPDDKRDPYGGGSGSQYVPYGTGAGDSNTRSP
SYNQPGGSSSGDGYGSQNGNQPDNRQDPYGGGSGGEYDLYGSGVGDSNTRRPPYNLGGGN
EISPGGGQPYWPVTSRPDESQPENRPYPGRPDSDNSVYGSGYGGGQYGPGGQRGSAPLLI
RVYPNNTETVRYGGDVVLQCRDEGLNRAAVRWVREGGRPLRPNYLERKGRLELYNVTPSD
SGVYICQAPAFLRQPGAEARITVEVETSFPTTRPVFSACKPHEATCGNGQCIPKSAICNS
VYDCADHSDEDNCGSSGQCQPNEFVCANRKCILKTWRCDSEDDCGDGSDELNCGTPAPGS
PCLAVEFSCATNNQCIPKSFHCDSQSDCIDGSDEIGCVGVYISKPPQPSYVRLNPGDELS
LKCEAVGVPVPLVSWRLNWGHVPPQCTFTSDNGIGVLNCPNMQPQHSGAYSCEAINNKGT
TFATPDAIVHVNKTDPCPPGYFNNDAHSQSECIRCFCFGETTQCRSADLFTYNMPTPLGE
GGTRFVTVTHPIARDISIGAPMNSEYFYQPLRNGATITRIASGDMGRFNDAYPYVTLPES
YNGNQLTSYGGHIRYTIAPHGSGYGSDETAPTIIIKGKYFSLYHFYRGDTSRSINIEARL
TPENWVVLDENGSQSQSTREIIMMTLDNVEMILLRADLHNAGVNITDFAMESAQHINVGL
GAASLVEECTCPPGYEGLSCEKCAVGYTRDSSGEWLGSCVREACPPGTYGDPSSGFTCKP
CNCPLTNRENNFASGCSLGPDGGVVCNCRPGYEGRNCEKCSPNYEGNPLIVGDSCKPKTT
KKCNSAGTKQIRLPDECVCKANVQGRNCDTCKNNSFFLSEDFGGGCALCFCMAVTQQCTS
SNLRRTTTAVQFTVPDIVNQVRVYNSSVGRGSLQAVRYSVPTETSVQPQFYSGGLAASSV
PAVRNNVYYWSLPNGFNGDLVTAYGGFLRYTLVNVPNPQNSAPDVQLISNTNPTFHYTGN
FKPSYDGTLNVSIPILETGWRRYDGQEVLREFFLAALVDVKAILIKGTYSEDSPMAIPIS
ASIDKADLYGTGPEALHVEQCVCPPAYTGTSCESCAPGYTRGDRTIYLKECIPCNCNGHS
NMCNPKSGECYDCRDNTAGAHCELCKPGYERDGYGNCVASDNFISTQQPCRCDPDGSEGP
CDASGLCSCKPNVEGDYCDRCRPGTYGLDRNNPDGCLSCYCSGVTNECHEGRHYSRLPIA
APVFGENNGGYSLTDINAQNIYNEHFVPVPDKSELMYIFSFPPEEELYWSLPIFPGNRVL
SYGGSLSIRQEFRSNVEDAVSQTGVDVVLVGKDTSLFWSNPTPIRSGVPLNYQVVLSEDN
WFLLNTATPVTRQTFMSVLKDLKRVLVRATLDPSVLSTSIADVSMDTATEMYQENLPQAK
GVEVCMCPSGYTGTSCEGCSPGYYKDISGRCQQCACNGHDCQLDAYGQTVCNCRPPYTGP
DCSTVAGEPSVTTTSTQSPLPEVTVTVRIIEPQNIRDLHVGSSVNYTCQAQSRYTDRLRI
TWLKADGYLPQGRSQVDENNGVLLLTNLQPSDSGQYICQSSDGFSTAQDSVTLIVPANDM
TPPSVSIRPVPRDYYEGDRVELECTATGNPAPTITWQRDSRRPLPASAESFDELFIIESA
RREDSGEYRCIATNAVSSEVTRVVINIRPRPSWPAQEQLTVSPTSQNIDEGQSSKFVCTG
TPAIPVGSIQWIRQDNAPFADNVRSDNGVLYIEYARPENDGIYLCQSSAGNVSPQSAVIT
IIPTYNPEPGKESNISISVESLRIPAGETGTIECTPHGTILPTIKWSKYGGEFGSGTSQR
GNTLIINDAKEDDGGYYLCEGIVDRVPIVSNYVYVDIERREQPTVDIWPQGERAVTLGTE
YELVCRVTGGTPEPDVTWSRGGSRPLSPHVHIRPQNTLKFDHVDVNDEGEYFCTATNVAG
TATARSVIKVRSPPVITITPTNFQEVPLGSSVNVECRADGYPLPLVSIKTGRDLREIVRP
TPSLAALRIPSITERDDGEYICTATSAAGTIEEPFEIRVSRGDIGVEYEIGGSGDDEIPN
DNLQNIPTGRTDTLIAYENEPEITIHCNGSNGFEARWDRGDRQPLQRNAFQADSRLIIRD
VSKSDSGLYVCSLYNRYNGDVVKANYTNLQVVTRPKITLRPANQTVHPGQSLTVECLVEG
DDILDVTWRYDRPPSRRVEIRGPVLVFNNIEVEDAGRYHCIARSRYGNDTATADVIVTEY
TDRPSSGSHSNEQYAHAGAGVHLSCNVSQPNLRIYWTKDGRPIPRSRQKSDGSLFIKRAQ
KSDSGRYECLVHDQYGRKSSNYINLHIEGIECTEFDFRCFDNSDCIHKSMVCNGYRDCYD
NSDEENCLYRNKRYKSWQYEDELLPAGARDADSASLVTIDQPRRKFRVSENVEVICIGRS
RDVTLRWERPDTNLYLVTNPFGGGSRLLINGVQESDAGVYRCIGTDPYGVSSYDDFVLEV
EPGSSNAIYPDNRDGPISHYTAHLRESVDLPCRHDLNEPVIIEWKREYQPLPAEVRNNQP
ILHLESVTEADAGIYVCQVSNQEVTVAAKAILKVEGVVPQFDGKSWLSLPALKDAYRQFD
IEVYFKPTDNNGLILYNSQNQGRMGDYIGLRLLDGIPEFIFDAGAEPVIVRGDRPLQLNT
WHTIRVSRISSKVTMDVDDTGPFITDSQEDWSVLELSQPMYIGGVPDIDQLPAELAGTDG
FIGCVSNLILGHEEKNIILDSLEQYQVGECRSCTPNLCVNDGICQEARNERGYLCICAPG
YAGWNCERTGEACRAGLCGPGKCTETADGYKCACPMSYTGRNCETKQLIAYPAFTGSAFL
AINAPPPSRSLKMSLKIRAATPVTDGIIMYCAESARGQDGFTSLTVRNGRLEFRYFLGSG
STPVILTSEKPLPANQWIDIQIARLAGSVSMKTHVGRTSNTLEKNLDRPTESLRFETPMF
VGGVDDSTVVINPNTLVSAGFSGCIKDVVLNSNAVDINSSIKSSNIQECNTYDRGDIQAS
ETCECKNGGSCSSESTNCICPAGYTGTYCESRVASYLMSPPPPVNPCSLHPCRNGGTCKP
DYGSWLNYTCDCPLGYAGASCQMPLELRQSVGFNGNGYIELPANLLRYDELASDPAVIAL
AVHTTNDGVLAYQREGQGSPNEGDYFILRIESGFVIFDWNLGGGESSILVDVPINDGERH
QIAVHLYEDGHAMLTVDGVDKSAPATGITNIMNADSNIYIGGMPNWVNIHGYPGFIGCIE
HVELTGNNRALELRDVAVAGRNTQLCRDY
*(1169 a.a.)

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