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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_TrvaFAMAMG11893_5prime_partial:A_TrvaFAMAMG_TR10716c2_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
RNA-seq EntryA_TrvaFAMAMG_TR10716c2_g1_i1
Sequence
(Amino Acid)
GGGSGSQYDPYGTGAGDSNTRRPPYNQPGSGDNTPDNGYGSRPENRPDDRRDPYGGGSGS
QYDPYGTGAGDSNTRRPSYNQPGSGDNTSGGGYGSQTGGQPDDKRDPYGGGSGSQYVPYG
TGAGDSNTRSPSYNQPGGSSSGDGYGSQNGNQPDNRQDPYGGGSGGEYDLYGSGVGDSNT
RRPPYNLGGGNEISPGGGQPYWPVTSRPDESQPENRPYPGRPDSDNSVYGSGYGGGQYGP
GGQRGSAPLLIRVYPNNTETVRYGGDVVLQCRDEGLNRAAVRWVREGGRPLRPNYLERKG
RLELYNVTPSDSGVYICQAPAFLRQPGAEARITVEVETSFPTTRPVFSACKPHEATCGNG
QCIPKSAICNSVYDCADHSDEDNCGSSGQCQPNEFVCANRKCILKTWRCDSEDDCGDGSD
ELNCGTPAPGSPCLAVEFSCATNNQCIPKSFHCDSQSDCIDGSDEIGCVGVYISKPPQPS
YVRLNPGDELSLKCEAVGVPVPLVSWRLNWGHVPPQCTFTSDNGIGVLNCPNMQPQHSGA
YSCEAINNKGTTFATPDAIVHVNKTDPCPPGYFNNDAHSQSECIRCFCFGETTQCRSADL
FTYNMPTPLGEGGTRFVTVTHPIARDISIGAPMNSEYFYQPLRNGATITRIASGDMGRFN
DAYPYVTLPESYNGNQLTSYGGHIRYTIAPHGSGYGSDETAPTIIIKGKYFSLYHFYRGD
TSRSINIEARLTPENWVVLDENGSQSQSTREIIMMTLDNVEMILLRADLHNAGVNITDFA
MESAQHINVGLGAASLVEECTCPPGYEGLSCEKCAVGYTRDSSGEWLGSCVREACPPGTY
GDPSSGFTCKPCNCPLTNRENNFASGCSLGPDGGVVCNCRPGYEGRNCEKCSPNYEGNPL
IVGDSCKPKTTKKCNSAGTKQIRLPDECVCKANVQGRNCDTCKNNSFFLSEDFGGGCALC
FCMAVTQQCTSSNLRRTTTAVQFTVPDIVNQVRVYNSSVGRGSLQAVRYSVPTETSVQPQ
FYSGGLAASSVPAVRNNVYYWSLPNGFNGDLVTAYGGFLRYTLVNVPNPQNSAPDVQLIS
NTNPTFHYTGNFKPSYDGTLNVSIPILETGWRRYDGQEVLREFFLAALVDVKAILIKGTY
SEDSPMAIPISASIDKADLYGTGPEALHVEQCVCPPAYTGTSCESCAPGYTRGDRTIYLK
ECIPCNCNGHSNMCNPKSGECYDCRDNTAGAHCELCKPGYERDGYGNCVASDNFISTQQP
CRCDPDGSEGPCDASGLCSCKPNVEGDYCDRCRPGTYGLDRNNPDGCLSCYCSGVTNECH
EGRHYSRLPIAAPVFGENNGGYSLTDINAQNIYNEHFVPVPDKSELMYIFSFPPEEELYW
SLPIFPGNRVLSYGGSLSIRQEFRSNVEDAVSQTGVDVVLVGKDTSLFWSNPTPIRSGVP
LNYQVVLSEDNWFLLNTATPVTRQTFMSVLKDLKRVLVRATLDPSVLSTSIADVSMDTAT
EMYQENLPQAKGVEVCMCPSGYTGTSCEGCSPGYYKDISGRCQQCACNGHDCQLDAYGQT
VCNCRPPYTGPDCSTVAGEPSVTTTSTQSPLPEVTVTVRIIEPQNIRDLHVGSSVNYTCQ
AQSRYTDRLRITWLKADGYLPQGRSQVDENNGVLLLTNLQPSDSGQYICQSSDGFSTAQD
SVTLIVPANDMTPPSVSIRPVPRDYYEGDRVELECTATGNPAPTITWQRDSRRPLPASAE
SFDELFIIESARREDSGEYRCIATNAVSSEVTRVVINIRPRPSWPAQEQLTVSPTSQNID
EGQSSKFVCTGTPAIPVGSIQWIRQDNAPFADNVRSDNGVLYIEYARPENDGIYLCQSSA
GNVSPQSAVITIIPTYNPEPGKESNISISVESLRIPAGETGTIECTPHGTILPTIKWSKY
GGEFGSGTSQRGNTLIINDAKEDDGGYYLCEGIVDRVPIVSNYVYVDIERREQPTVDIWP
QGERAVTLGTEYELVCRVTGGTPEPDVTWSRGGSRPLSPHVHIRPQNTLKFDHVDVNDEG
EYFCTATNVAGTATARSVIKVRSPPVITITPTNFQEVPLGSSVNVECRADGYPLPLVSIK
TGRDLREIVRPTPSLAALRIPSITERDDGEYICTATSAAGTIEEPFEIRVSRGDIGVEYE
IGGSGDDEIPNDNLQNIPTGRTDTLIAYENEPEITIHCNGSNGFEARWDRGDRQPLQRNA
FQADSRLIIRDVSKSDSGLYVCSLYNRYNGDVVKANYTNLQVVTRPKITLRPANQTVHPG
QSLTVECLVEGDDILDVTWRYDRPPSRRVEIRGPVLVFNNIEVEDAGRYHCIARSRYGND
TATADVIVTEYTDRPSSGSHSNEQYAHAGAGVHLSCNVSQPNLRIYWTKDGRPIPRSRQK
SDGSLFIKRAQKSDSGRYECLVHDQYGRKSSNYINLHIEGARDADSASLVTIDQPRRKFR
VSENVEVICIGRSRDVTLRWERPDTNLYLVTNPFGGGSRLLINGVQESDAGVYRCIGTDP
YGVSSYDDFVLEVEPGSSNAIYPDNRDGPISHYTAHLRESVDLPCRHDLNEPVIIEWKRE
YQPLPAEVRNNQPILHLESVTEADAGIYVCQVSNQEVTVAAKAILKVEGVVPQFDGKSWL
SLPALKDAYRQFDIEVYFKPTDNNGLILYNSQNQGRMGDYIGLRLLDGIPEFIFDAGAEP
VIVRGDRPLQLNTWHTIRVSRISSKVTMDVDDTGPFITDSQEDWSVLELSQPMYIGGVPD
IDQLPAELAGTDGFIGCVSNLILGHEEKNIILDSLEQYQVGECRSCTPNLCVNDGICQEA
RNERGYLCICAPGYAGWNCERTGEACRAGLCGPGKCTETADGYKCACPMSYTGRNCETKQ
LIAYPAFTGSAFLAINAPPPSRSLKMSLKIRAATPVTDGIIMYCAESARGQDGFTSLTVR
NGRLEFRYFLGSGSTPVILTSEKPLPANQWIDIQIARLAGSVSMKTHVGRTSNTLEKNLD
RPTESLRFETPMFVGGVDDSTVVINPNTLVSAGFSGCIKDVVLNSNAVDINSSIKSSNIQ
ECNTYDRGDIQASETCECKNGGSCSSESTNCICPAGYTGTYCESRVASYLMSPPPPVNPC
SLHPCRNGGTCKPDYGSWLNYTCDCPLGYAGASCQMPLELRQSVGFNGNGYIELPANLLR
YDELASDPAVIALAVHTTNDGVLAYQREGQGSPNEGDYFILRIESGFVIFDWNLGGGESS
ILVDVPINDGERHQIAVHLYEDGHAMLTVDGVDKSAPATGITNIMNADSNIYIGGMPNWV
NIHGYPGFIGCIEHVELTGNNRALELRDVAVAGRNTQLCRDY
*(1113 a.a.)

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