SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariMSG13094_internal:A_SariMSG_c25554_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence-like_[Helicoverpa_armigera]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
RNA-seq EntryA_SariMSG_c25554_g1_i1
Sequence
(Amino Acid)
TDNTHAVADITFMPLRVKDNKWNWEVLVVTYDGKLRGYLVSQTEGYKLHHTFHFPGAVGA
LTYCAPHSTLYVAGLPRGAGKDPTSPLSAGITAWRILNDDPFYKLSVVSDQLEAQLANER
FQLYIPFVTSKNMAFIVQMEISPDNSKLVCLHCNGDISVWRLPLLKAEQRWALVSQPDHD
LQNPLVQDNKPGKKDPSKYCAADVNWWTNEEIILSRFSGAVSVCSLEDMINILGKKPEFF
QGSPQVTRAHDGTFMILECESNVLPAKKSPSDESMGMVKTEADVEDTMLEVTKELVRTVL
FAITDIETFQPKPKRITVVSRVYRLLGLKSTTPAELFSRKIESGNYAEALALAETFNLDS
DLVYQQQWRKNPVSTDAIQKYLSKVSKKIWAVHQCVDRLPETLPAARELLHFGLDLTNEK
ILDEINKEAEQKIINPEEITLEHLNAYTSELLRCRHVMLFYKERLALYEAILKSEKSTYV
KDEYDRLRSNSIGNSAIEIAKEGRIEALTCLWPHIKTIPMQLTVLEKLPETINPLEFQHL
LPSPKPMQWFEERSPIKIPPLRHENDWCRKSIFRSIWSSNWSEESTPEIEIPVDMPGSSD
DIAKWYEKRAREIEERSGLVSHALTLVTIATVGGGVQGLDKILFHLLTLDTLIYDINVEG
ITLKELEKMTLLETCTHLMKMSTQETFVSDLKQYMIPFLKRYERLTSGSDICVDGLTDYL
ESRSRVDLSPILWVLQSPKEFELDVRTHLDLVEKCLFAYPDTDQLDKACDLLNTILRETD
GSMSNNELMRRVKVLERVVSACTRLAWRGLHVPPHSLHALPAEPQHVHKLLTRLARSLAN
GEEKPTHQDWEKLLKDILELQSTVFDCITKDQCYEIYASSLLTSGMASSIKLASEVLTCE
VNTRTAPHLVTYARSVDLVLNAAKEYFNSASALSDPALELAKCCLSLIKDGNPDIQRELD
LIAALQILSAFNIPLLPIQVRLCEDNMSLIEECLKADQNAYLATHKLLKLATLLQISGDD
ERTREGRVLQLVGEYAQIGR
(345 a.a.)

- SilkBase 1999-2023 -