SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariMSG12997_5prime_partial:A_SariMSG_c25503_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X4_[Papilio_machaon]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
RNA-seq EntryA_SariMSG_c25503_g1_i4
Sequence
(Amino Acid)
QGTDVYIASLGRKIEARVITLSQRRASFAVRQSSSAVNACALFCHRENFLTFVFYNNRIT
MRIGGVPVAALLLLALLALQASKAEDIYWEGEDAFLEVKPEDTGLTGHLQRFKRDLFDTF
SIFGKTPDDKYETATEDDEDTSPDGKDDDLETEGSGLPDNRIETELREKTLRVTFVVMEP
YRDNYSNRDSIEFQNLSQSLADSVNLLFESLPGTQKASLVRIQSRLDGFSCKVTLDIVTT
GYDNTDRIAQILRDHIVNRALLGNATVKDDGFSANVIDPETYQEQTNIDKPESLPEDENE
DEGDNEVNNENFNTVPCIDPLPCYSSSKTYCNTQKCDGVEQCPFGDDEKDCESFNEGEDT
YDINTTSAPQRGDQSIDIDLDTTTTEYDSTTSRTTVPPPESDLGKTLICLADEIRCDFTR
CIKMSQRCDSRPDCDDGTDEADCPESCGSDDFRCDNGRCIEGIKRCDGVSDCDGYEDEKN
CACRSDEFRCVSDGSCIESRKRCDGVNNCSDNSDEEGCGESQCPPEFNFTCGPLSSNPCA
KKCDGVVECDGSEDEESCQDTCNHFCDARCLDDDKICDGIQHCEDGSDESNCDKCDGPED
FRCDTGECLHIYSKCNDIPECPKGEDELNCNATIIPTTSGCLSNQFACKDGTCIDIQFYC
DKRQDCYDNSDEEDCPTCASNDEFKCRDGSCISSYDFCNGKLDCPDGSDEENCPCDANSW
QCRSGQCVPESARCDGRLDCNDNSDEEECSTESISIGRSSTTARSIYTTTQTSVYDKTPL
YPSGPLGSPEEPGFVTGRPSRPGTDSNDSNYNGPYTELPIAGPVALNIKTYPQGQVIRYG
GDVVFQCRDESTQRAPVRWVKEGGRPLKTGSRDVNGRLEMFAVTPSDSGIYICQAPSFLR
YPGSEVRVTLEVETAPVTQRPAFITCQQHEATCGNGQCIPKSAVCDGKIDCADNSDEDTC
HTNGMCEPNQFQCKNGKCVLKTWLCDSDNDCDDNSDEENCAASDPGHPCKSVEFTCSSGT
QCVPKSYHCDGQSDCMDGSDEIGCAPVHVTRPPKPSNVRLNPGDTLTLVCEAIGMPVPLI
SWRLNWGHVPSKCTSVSQNGIGTLTCNNMEPQDSGAYSCEAMNNKGTTFAAPDSIVHVNK
TDPCPPGYFNNEARSQNECIRCFCFGESTQCRSADLFTYNMPTALGEGGTRLLGVTQTPN
GEIRTDSPIGNQYLYQPLRNGATVTKVMTEDAGWQWSSAHPYLTLPETYNGNQLTSYGGH
VKYTLSPHAPVYTPDTSTPTIIIKGKYGNLFHYHRGDTLRNTNIEARLTPENWEKSSPRG
LVPATREDIMMTLDNIEQILLRADLNNAGVNISDFAMESAQHINVGLGVANLVEECTCPP
GYEGLSCERCAIGYVRESTGRWLGNCVRETCPPGTYGDPASGYACKPCPCPLTNRDNQFA
RTCSIGYDGNVVCDCNPGYEGKRCEVCASGYVGNPIIPGDSCKPKPSDNCNPTGTRYVRP
PDECDCKDNVQGRYCDQCKNDSFYLSEDFRHGCSICFCSGVSQLCRSSDLRRKTTAVTFN
VPDVINQVEVYNSAPAGPVDSVRYTAPLVVEDKPELVRGQIAIPSLQRSQSSVYYWSLPN
SFAGDKVTSYGGYLHYTLQNVPTYDTRLRNNAADVQLISLNHLTFHYTGNFQHSFDGTLN
ASIQFLEKGWQRIDGKEVSREHFLLALADVKTILIKATYSENAPLATPLMASIETAEPTG
DGPRALHVEQCVCPTGYVGTSCEDCAPGFTRSSSGLYLEHCGPCLCNGHSNMCHPETGIC
YDCADFTDGPHCEICKPGYERDSYGNCVQSNNKEPSCRCDPAGTVSPCDESGYCYCKEYV
EGENCDKCRSGTFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTI
MDLNAELVINDDFVPAPDKSELMYIFSFVPHQELYWSLPVFPGNRILSYGGFLYLRQEFR
SNDYGAVSEPGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRD
RFLRVLSNLKRVLVRATVASNILSTSIADVSMDTATISNDPELPFAKGIEVCMCPPGYVG
TSCESCDSGYFKDQSGRCQKCSCNGHECQLDSYGQVVCNCRPPYTGSDCSTIAGEPAVVS
PTTLSPPFGTTVVVKITSPTIKIQEVGSSVNFTCQAESPLSNNRLRISWSKVDGYLPQGR
TQVDENSGVLLITNLQISDSGQYICQTSDGVNTGQAIATLKVPGNEMTMPTASIKPTINE
YYEGDRIELKCETSGNPAPTIRWQRASNRPLPGSAEHFDERLIIESALEEDSGEYRCIAS
NAVGSADRTAIITVRPRPSLPPRDKLTVSPTSPTVDEGQSTRVVCTGTISVPAGSIDWIR
QDGAPLSVNIRSENGVLYIDYVRLEDRGVYVCQTSAPNVAPVPVLLTVVPQGTPSPSEAS
NITVSVDRLKVPTGETGTVDCNPQGYPLPLIKWSKHQSSFGPGTSQRGNTLIINRAQEDD
QGYYLCEGVVNGSPIAYIYVFVEIEKREQPRVEIWPPGEQTVSLGSQYELHCRVTGGYPE
PDVTWSRSGGKPLATYAHIQPHNVLKFDHIDVNDEGEYTCTATNVAGITSASAVLKVRSS
PEITITPSNFQQVLRGDPVSVECRANGYPDPIVSIKTSVDLREVVRPSPRIAVLSIPSAS
ERDSGDYICVATSPAGTVEEQFGIRVDRGDGGDTVFEGGEGSGDDGYGEPVGPTDQTPSD
YDNRPGELIAIEGQPEITINCNGSAGFEPRWSRVDRRPFQSNAIQRDSRLIIYNVSPSDS
SQYVCSLYDINTREIAKAAYTRLLVISVPRITLRPPNQTVRPGQSPTVECVVEGDDIIDI
TWKPYNRALSPRVEPRGATLIFHQIEVEDAGKYECFARNRYANASAIAEVIVSEDSNRPG
SESHDNEQFAHSGAAVHLSCNVTQRDLIIEWIKDGRPVPRSRQKQDGSLFIKIAQKSDSG
RYVCHIRDRYGRHTSNYINLHIEGIECLETEFRCYDHSGCIDEELLCDDFQDCKDNSDEE
NCLYRDKRYSDSIWDYVDQLIPVTGPSGGEGQVAELVSIVEPRSSYRVSENLEVVCKSIA
RNINVKWERYGTNQYVETKVYGDGAVLVIHGVQESDAGIYRCTGMDPFGATFYRDFRLVV
VPGNDYKYPVTSVPFVLYEARLSDSIDLPCQHSLEEPVNIEWRKEYSSLPANSASNQPTL
HIESVTEADAGTYVCRVSNNRNAIEAKAILRVTGVVPRFDGESWLSLPSLKDAYKQFDIE
VSFRPTDYNGLILYNSENQGRTGDYVALQLVEGTPQFLLETGAGIVKVKGDRPLQLNEWH
TIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVPDFDQLPIDLAGASGFV
GCISMLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVCLCAPGFG
GNNCDRIGESCRPGLCGPGKCMNTADSYKCACPVTYTGKNCEVKQLIEYPAFTGSAYLAI
KPPTSTRSLKMSMKIKAASPVSDGIIMYCAETPRGYGGFISLAVRNGKLEFRYDLGGGNK
PVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWLEGRTELLRLETPMFVGGVD
DSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSNNDRGDIPEAEGTCQ
CRNGGSCAIDSISCICPLGFTGTYCENRVPNPLITSRIGYSDPCSLRPCRNGGTCRPDLN
SRINHTCDCPLGFAGASCQMPLQLLQSVGFSGNGYVELPAELLRYDDLQSEPAVIALAIH
TTNDGVLLYQREALSPYDRGDFILLRIERGVVVLDWDFGSGTSTITIENIRVNDGERHQI
IAKLHEDNTVSLSVDSVTRTGTTTGLSNLMNADSNIYIGGIPDRINLRGYPGLIGCIEQV
ELMGTSRGLNLGQVAVAGRNTQRCREYTRY
*(1329 a.a.)

- SilkBase 1999-2023 -