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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariMSG12990_5prime_partial:A_SariMSG_c25503_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X4_[Papilio_machaon]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
RNA-seq EntryA_SariMSG_c25503_g1_i3
Sequence
(Amino Acid)
QGTDVYIASLGRKIEARVITLSQRRASFAVRQSSSAVNACALFCHRENFLTFVFYNNRIT
MRIGGVPVAALLLLALLALQASKAEDIYWEGEDAFLEVKPEDTGLTGHLQRFKRDLFDTF
SIFGKTPDDKYETATEDDEDTSPDGKDDDLETEGSGLPDNRIETELREKTLRVTFVVMEP
YRDNYSNRDSIEFQNLSQSLADSVNLLFESLPGTQKASLVRIQSRLDGFSCKVTLDIVTT
GYDNTDRIAQILRDHIVNRALLGNATVKDDGFSANVIDPGTTLGTCSAHYLQCEDGSCIP
ESARCNGHKDCNSGSDEAGCVIETYQEQTNIDKPESLPEDENEDEGDNEVNNENFNTVPC
IDPLPCYSSSKTYCNTQKCDGVEQCPFGDDEKDCESFNEGEDTYDINTTSAPQRGDQSID
IDLDTTTTEYDSTTSRTTVPPPESDLGKTLICLADEIRCDFTRCIKMSQRCDSRPDCDDG
TDEADCPESCGSDDFRCDNGRCIEGIKRCDGVSDCDGYEDEKNCACRSDEFRCVSDGSCI
ESRKRCDGVNNCSDNSDEEGCGESQCPPEFNFTCGPLSSNPCAKKCDGVVECDGSEDEES
CQDTCNHFCDARCLDDDKICDGIQHCEDGSDESNCDKCDGPEDFRCDTGECLHIYSKCND
IPECPKGEDELNCNATIIPTTSGCLSNQFACKDGTCIDIQFYCDKRQDCYDNSDEEDCPT
CASNDEFKCRDGSCISSYDFCNGKLDCPDGSDEENCPCDANSWQCRSGQCVPESARCDGR
LDCNDNSDEEECSTESISIGRSSTTARSIYTTTQTSVYDKTPLYPSGPLGSPEEPGFVTG
RPSRPGTDSNDSNYNGPYTELPIAGPVALNIKTYPQGQVIRYGGDVVFQCRDESTQRAPV
RWVKEGGRPLKTGSRDVNGRLEMFAVTPSDSGIYICQAPSFLRYPGSEVRVTLEVETAPV
TQRPAFITCQQHEATCGNGQCIPKSAVCDGKIDCADNSDEDTCHTNGMCEPNQFQCKNGK
CVLKTWLCDSDNDCDDNSDEENCAASDPGHPCKSVEFTCSSGTQCVPKSYHCDGQSDCMD
GSDEIGCAPVHVTRPPKPSNVRLNPGDTLTLVCEAIGMPVPLISWRLNWGHVPSKCTSVS
QNGIGTLTCNNMEPQDSGAYSCEAMNNKGTTFAAPDSIVHVNKTDPCPPGYFNNEARSQN
ECIRCFCFGESTQCRSADLFTYNMPTALGEGGTRLLGVTQTPNGEIRTDSPIGNQYLYQP
LRNGATVTKVMTEDAGWQWSSAHPYLTLPETYNGNQLTSYGGHVKYTLSPHAPVYTPDTS
TPTIIIKGKYGNLFHYHRGDTLRNTNIEARLTPENWEKSSPRGLVPATREDIMMTLDNIE
QILLRADLNNAGVNISDFAMESAQHINVGLGVANLVEECTCPPGYEGLSCERCAIGYVRE
STGRWLGNCVRETCPPGTYGDPASGYACKPCPCPLTNRDNQFARTCSIGYDGNVVCDCNP
GYEGKRCEVCASGYVGNPIIPGDSCKPKPSDNCNPTGTRYVRPPDECDCKDNVQGRYCDQ
CKNDSFYLSEDFRHGCSICFCSGVSQLCRSSDLRRKTTAVTFNVPDVINQVEVYNSAPAG
PVDSVRYTAPLVVEDKPELVRGQIAIPSLQRSQSSVYYWSLPNSFAGDKVTSYGGYLHYT
LQNVPTYDTRLRNNAADVQLISLNHLTFHYTGNFQHSFDGTLNASIQFLEKGWQRIDGKE
VSREHFLLALADVKTILIKATYSENAPLATPLMASIETAEPTGDGPRALHVEQCVCPTGY
VGTSCEDCAPGFTRSSSGLYLEHCGPCLCNGHSNMCHPETGICYDCADFTDGPHCEICKP
GYERDSYGNCVQSNNKEPSCRCDPAGTVSPCDESGYCYCKEYVEGENCDKCRSGTFGLES
ANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDDFVPAP
DKSELMYIFSFVPHQELYWSLPVFPGNRILSYGGFLYLRQEFRSNDYGAVSEPGTDIVLV
GDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNLKRVLVRAT
VASNILSTSIADVSMDTATISNDPELPFAKGIEVCMCPPGYVGTSCESCDSGYFKDQSGR
CQKCSCNGHECQLDSYGQVVCNCRPPYTGSDCSTIAGEPAVVSPTTLSPPFGTTVVVKIT
SPTIKIQEVGSSVNFTCQAESPLSNNRLRISWSKVDGYLPQGRTQVDENSGVLLITNLQI
SDSGQYICQTSDGVNTGQAIATLKVPGNEMTMPTASIKPTINEYYEGDRIELKCETSGNP
APTIRWQRASNRPLPGSAEHFDERLIIESALEEDSGEYRCIASNAVGSADRTAIITVRPR
PSLPPRDKLTVSPTSPTVDEGQSTRVVCTGTISVPAGSIDWIRQDGAPLSVNIRSENGVL
YIDYVRLEDRGVYVCQTSAPNVAPVPVLLTVVPQGTPSPSEASNITVSVDRLKVPTGETG
TVDCNPQGYPLPLIKWSKHQSSFGPGTSQRGNTLIINRAQEDDQGYYLCEGVVNGSPIAY
IYVFVEIEKREQPRVEIWPPGEQTVSLGSQYELHCRVTGGYPEPDVTWSRSGGKPLATYA
HIQPHNVLKFDHIDVNDEGEYTCTATNVAGITSASAVLKVRSSPEITITPSNFQQVLRGD
PVSVECRANGYPDPIVSIKTSVDLREVVRPSPRIAVLSIPSASERDSGDYICVATSPAGT
VEEQFGIRVDRGDGGDTVFEGGEGSGDDGYGEPVGPTDQTPSDYDNRPGELIAIEGQPEI
TINCNGSAGFEPRWSRVDRRPFQSNAIQRDSRLIIYNVSPSDSSQYVCSLYDINTREIAK
AAYTRLLVISVPRITLRPPNQTVRPGQSPTVECVVEGDDIIDITWKPYNRALSPRVEPRG
ATLIFHQIEVEDAGKYECFARNRYANASAIAEVIVSEDSNRPGSESHDNEQFAHSGAAVH
LSCNVTQRDLIIEWIKDGRPVPRSRQKQDGSLFIKIAQKSDSGRYVCHIRDRYGRHTSNY
INLHIEGIECLETEFRCYDHSGCIDEELLCDDFQDCKDNSDEENCLYRDKRYSDSIWDYV
DQLIPVTGPSGGEGQVAELVSIVEPRSSYRVSENLEVVCKSIARNINVKWERYGTNQYVE
TKVYGDGAVLVIHGVQESDAGIYRCTGMDPFGATFYRDFRLVVVPGNDYKYPVTSVPFVL
YEARLSDSIDLPCQHSLEEPVNIEWRKEYSSLPANSASNQPTLHIESVTEADAGTYVCRV
SNNRNAIEAKAILRVTGVVPRFDGESWLSLPSLKDAYKQFDIEVSFRPTDYNGLILYNSE
NQGRTGDYVALQLVEGTPQFLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDN
SGPFIAESPDQWTVLELNQPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMA
LALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVCLCAPGFGGNNCDRIGESCRPGLCG
PGKCMNTADSYKCACPVTYTGKNCEVKQLIEYPAFTGSAYLAIKPPTSTRSLKMSMKIKA
ASPVSDGIIMYCAETPRGYGGFISLAVRNGKLEFRYDLGGGNKPVVLTSNKTLPANEWTD
VHIARFGHSVSLKINLVHSYEQWLEGRTELLRLETPMFVGGVDDSIVLNNNTGVTGGFSG
CIKDVMIYENAVDIVNSSIQSANVQECSNNDRGDIPEAEGTCQCRNGGSCAIDSISCICP
LGFTGTYCENRVPNPLITSRIGYSDPCSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGAS
CQMPLQLLQSVGFSGNGYVELPAELLRYDDLQSEPAVIALAIHTTNDGVLLYQREALSPY
DRGDFILLRIERGVVVLDWDFGSGTSTITIENIRVNDGERHQIIAKLHEDNTVSLSVDSV
TRTGTTTGLSNLMNADSNIYIGGIPDRINLRGYPGLIGCIEQVELMGTSRGLNLGQVAVA
GRNTQRCREYTRY
*(1343 a.a.)

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