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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariMSG11373_5prime_partial:A_SariMSG_c24529_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		pre-mRNA-splicing_factor_Slu7_[Helicoverpa_armigera]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000386 F second spliceosomal transesterification activity
GO:0000389 P mRNA 3'-splice site recognition
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006886 P intracellular protein transport
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0030628 F pre-mRNA 3'-splice site binding
GO:0034605 P cellular response to heat
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_SariMSG_c24529_g1_i1
Sequence
(Amino Acid)
VLFRSGQFTKLDTYYNKGVDVTKTATKYRKGACENCGAMTHKKKDCLERPRKIGAKFSNA
GIASDEFSQPDLNLSYDGKRDRWNGYDPSQHKAIIEEYQKVEDAKRELRAKKLEEDPTAT
EEDDNEGEDEDKYVDEVDMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTR
SMRDNPNPSGSESEYLGENFARFTGDTRSHAAAQLFAWEAHARGLDVHLLAEPTKLQLLQ
NEYKDKKEHFKTQVKQSVLEKYGGEEHLKVPPKELLIAQTEVFTRYNRDGTLVQGPEKQL
AKSKYEEDVLINNHTSVWGSYWRDGQWGYKCCHSFIKLSYCVGEAGKSAVLDIVDNKPTT
GVQRSSDNQEKDKTTDNSSSSSSSSSSESSSSDSEPEIRSKTERTSKRRRNKKKTKKDKK
KELKKVKKEEDKLKKALEMEQKQQKRADYLLSIDERKRAYNSMTEVKAPTEEEMEAYQMK
RRREEDPMSQFM
*(163 a.a.)

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