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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariMSG10906_5prime_partial:A_SariMSG_c24265_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Amyelois_transitella]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_SariMSG_c24265_g1_i2
Sequence
(Amino Acid)
VLQQPPVKHQPKPVKKAQPPTSLKSTGLSLMKNYNTDSDSDASDSDGVSSTESKINIVTP
PEDVQTVVDKMAAYVARNGDEFADIVRAKNDPRFTFLEPDNIYYPYYRRLMQEKRGITVN
GKKKVGDDSEKWNVSFSIKKLKEPETILPKPALPYETSSDEDLEKQVEKQDEKEIEKEEV
KETEKEQNKETKTIDNSSEQQQEESKPQPLVQQTYDLNNIPPIIVYKMEGQLTKDLPLIR
AFEPPIKSAPVTKAPEVAESPKPEPAPVEQEKPPPKSIDVVIEKTPIREERKEEKIRDSS
PSHRREKTKHRDKRKDYTSKSEIRERRVDRTPEREKRREKESDRERKRAKYSKEELETEI
ISLVDNSDEFIDLTGEQSDSRGEGDVESNPRKQKDRRRRAAEFLKKVGVDPAAATLPTTS
LASAMVDTLELLRRKKMEEEEKRRRRDKRRHRDRREDGYHRKSRRRRYRSSDDEDDDSSK
KKKRKRDKKHSSKSRKKRRRDEDIDEGVDANPLNIDLTSTLKELRTRSPTKDLVLQDVDR
NSQHSLRQDSTDEENGRESPREMRKREKRTDREYSEGEWSSNSDDDSKSSRDI
*(197 a.a.)

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