SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariMG15533_5prime_partial:A_SariMG_comp30319_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016604 C nuclear body
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0042826 F histone deacetylase binding
GO:0044255 P cellular lipid metabolic process
GO:0047485 F protein N-terminus binding
GO:0072365 P obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter
GO:1903799 P negative regulation of production of miRNAs involved in gene silencing by miRNA
RNA-seq EntryA_SariMG_comp30319_c0_seq1
Sequence
(Amino Acid)
AYPGHAGGALAYGGKPVGVAPAQPRQPPAAPYAPQPYPPAQLRLHQPGYGSAALSYREGS
YGRGGGAVSEYRRKGARMSLLGTSYLPPPAPSVHHPPPADPPPFKKVCLMPEPMSIRPIP
HHQQLRVDTREPVNVYNTVEVLSPNPPSEPTVEDQALRTTKDDLLQQISKVDREMALAES
SLAQLKKKQVELEQTASKPARAEEPEEVPSRHRSLAHCIYAENRKKAAAAHGSLTHLGPE
VLYPLYNQPQDTEQYHENIRTNRTFRTRLLEHIRIVKEIAEKREDALADEYSRRAAEWAR
RVERIEQSQKRKAKDAKNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLH
EQEHEDKKMRSLTVVPPLLRDPADTTPIYIDTNRRCLDMKSEHKELQLRNVWSQGERELF
REKYLQHPKNFGTIASFLPRKNVKDCVRFYYLSKKCENYKQLLRKPRQRRSTRNPPRPAP
DPDLPAGVTTRLQRSQGTSGRCADAKEPNAEEGGVLVLGPGLEGMEVAPPPVSVPLPLAP
EPSCVPLPSAAPTSLPLLRPELIRTPPLPPSPPPASSAPLGPIPVSSPSPGLVINAPLSD
SPEPTPLLVLSAVPLPPSPPAPALVPLPALPELPSLPPPTTEATLTITIVTNSSPTTASL
PASTPSSSVVAVTSSCVTSSVVTSTAQATLTVAVPSPAPTPSSSGPGSAPPTPQPAQPPT
PTQPPPTPEAAVIERIGTPSSSTTATTTTVTTTSSSCAVCSTPGATRTISRSRTIHYGLK
EEAVGARVCEACHCRCVRSRYTRCPVPTCPGPRVRAKRLRHLPPRWHDLSLHLKKPLMDE
FQIPCELSKCCLTCFKRITRRVESVSEGGSAPDPSDEEAARFRTLLRDHGTAWDRIAALS
GRTPASLKAFYFTYRKKLQLDAVVGERTVAASRCTSSEESALSSGDTDTASAGSPPAHTH
PPASAASAPSHPPGPRTDAVAPRRHRRDEYDSSATETADEENDAPTTKSLPPTSIGIPPA
ANSSSSPAPSPAAVASTLASTSAAGCTVVCTAACTGTSTSTSGGVVQRNGPSAPQTVRDV
VLNLIEFSLTRDAHPVPPAIKPHQLKVSSSTGGRETLATLTVVNSSHNVVSGPRSPHRPT
ATITPISQSGQQDPGKDGLVVVHIEPRASPRPEPRADPRADMLAEARPDSLLDLTVKRSD
RDRRNDLTFPHPNKPNVYRNSNEYAYRGGQERESPTQYMCKTKGAASAAGAVRPAAGVLK
TAANSKGSITLGTPVETRFEARRTPPGSITAGTPVLSHHAHAVHQQHPPHQQQHQQHPQH
PQHPQHPQHPQHLAEKPRLDHYYKRRSPAYCTPAAPQRTHEPAYSPTSSGGYGRNPHGLE
QRQIIMADFITSQQMHGGARRDRLDRPERTERDGSPQYAAQYGAYSPQRRDSVSVIQRHT
PHMYPHHPQHPHHPHHPQHPHHPQHSQHPQHPPPGHEAFTSLVNVASAATALPVPGGDQA
KPEAKPQPSPQHAAQHQTQHQTQHATQHAPQHPHDVRLRDISLTQKYHPISQYQVIDRRV
KHSQYTIERDIQIAMQQRRENERAMAAMQERHAIEPHQSYQQHQQQQHQQQHQPQHSHQH
QQSIIHERHHVPGSGAQEGERRLGGAAGLVSGYGAGPGGKHRAHTPLHSDRKEPRGAGAG
SVGGALVSGGVVSVGVGGAAGVGGAAGAVGGAAGADQRSGTLTAASLIDAIITHQISQTS
DQRYPERTDRGATPADRERERERERDREELAQAAYTTSIKLGDLASNIINRDFCSPTTSL
IQHNRFNVASSEPYGVPSSGATNSVSVAVSSVGGASGAVGGAAGAVSGLSEEWKRRDAPK
HAPYLEPVSPPDNHQTNSSGERAGGGGGAGAGGGGGGGARRYGCVSGGSGVLTAFDYVTT
RIVEVMRSDADERGKALAFPTAPYTFPYSALNVAAATTDGVVPVTSSGGGGGGAGACVTS
GGVGPGGPPAPEPAPLMSAQYEPLSDED
*(668 a.a.)

- SilkBase 1999-2023 -