SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariASG12156_complete:A_SariASG_c36672_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		exosome_component_10_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000460 P maturation of 5.8S rRNA
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0008408 F 3'-5' exonuclease activity
GO:0009048 P dosage compensation by inactivation of X chromosome
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0035327 C euchromatin
GO:0044237 P cellular metabolic process
GO:0044822 F RNA binding
GO:0071028 P nuclear mRNA surveillance
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071044 P histone mRNA catabolic process
GO:0071048 P nuclear mRNA surveillance
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
RNA-seq EntryA_SariASG_c36672_g1_i4
Sequence
(Amino Acid)
MSIKSELNPEAPEFYPSTTSLDQEGSTTLLAAKDIKRPQMFFKDTIDNSENLWVPKISDK
PNSITPLALKILYDNYGRAIGYEHPYLAELTLYNPCPEFIEPDSEPPVFPLSLEETKFTY
VDTEEQLDELIEHLYCANELSIDLEHHSYRTYQGITCLMQISTIEGGDFIIDTLAIREHI
HKLNVILTDPKKLKVFHGADRDVLWLQRDFGVYLVGMFDTYRAAKALRLSGLSLKFLLQR
YCQIDVDKRHRLADWRMRPLPDVLISYARTDTHYLLYVWHIIKSELLKVGGEQLLLEVFK
SSQKVCGYTYNKEVFNESSHISLYIRSKQKFSIQQMTALKMLYKWRDENARREDESIQYL
FTNRVLLKLAKDLPCDMHTILNYCNIMPPFIKSNVLTIHKMILSCLELPNQPYVHISSPD
DSLEMMNPQSKIPSSSIAYDKTDSSSEGENHAVPNDNIDLLESEENPPDVPPFKNDTEIN
CTMVVSNLNAEAEVFIPPYDRYRKYRCLIQMKEINDFKEREAENELVRIEVIERPQQAQT
QIANDDNVATPSTSNAVFALPGNTLQRKRKLPSNQ
*(191 a.a.)

- SilkBase 1999-2023 -