SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_SariASG1014_5prime_partial:A_SariASG_c8900_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_U1_small_nuclear_ribonucleoprotein_C_[Amyelois_transitella]
Ontology
GO:0000243 C commitment complex
GO:0000387 P spliceosomal snRNP assembly
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0046872 F metal ion binding
GO:0071004 C U2-type prespliceosome
RNA-seq EntryA_SariASG_c8900_g1_i1
Sequence
(Amino Acid)
ETLFLPVTKFIGNISSVVCCDLLGNCIVKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHK
DNVKFYYQKWMEEQAQHLIDATTAAFKAGKIAQNPFGTKGASIPPPWDPSVMGPGGPRPP
VPAPGGPPGMIPPPTMGPGGPMAPPMMMGPHGPMPPMMGMRPPMMGPLMGPMGPMGPMGQ
MRPPLMNAPPMNKQ
*(64 a.a.)

- SilkBase 1999-2023 -