SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoSK17738_3prime_partial:A_BomoSK_comp14052_c0_seq4
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006260 P DNA replication
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0032807 C DNA ligase IV complex
GO:0033152 P immunoglobulin V(D)J recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070419 C nonhomologous end joining complex
GO:0071897 P DNA biosynthetic process
RNA-seq EntryA_BomoSK_comp14052_c0_seq4
Sequence
(Amino Acid)
MQNDEEGIVVKDTKSYYISSQRKAGWYKIKPEYTEGVLADLDLVIIGADEAADKTHGRAN
SFVVACAELSSTGRPQRWLSVSHVSNGLTHEERAGLCAELELHWKRTADHPPPEHLVFNE
RKPDFWIEPDHSVVLQIHATELVRTPKFGTPYTLQFQRVERLRHDKPVNDAMTIDEFKKL
IKNHSPVIKLAVNAISEDQLNKTSAKSPRKRQKKVLQVAEQFRTGIQDKVEVISNALAGR
RICILSDEEDCSRTELIKIVESHGGQVVANYDESCWCCVSGRCTSAVRACVRAR
(97 a.a.)

- SilkBase 1999-2023 -