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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoSK15394_5prime_partial:A_BomoSK_comp13692_c0_seq4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		Hrp59_protein_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031012 C extracellular matrix
GO:0042382 C paraspeckles
GO:0044822 F RNA binding
GO:0048306 F calcium-dependent protein binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
RNA-seq EntryA_BomoSK_comp13692_c0_seq4
Sequence
(Amino Acid)
DMDLQKEKERDRSRRGDRPSRFSDANRDRSSDRDRTESRRLFVSNIPYEFRWTELKDLFK
EKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLKEETGNER
RMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSLQFLESINVQPPLVKKVFVAN
LDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFDKQMLY
ERRMTVRMDRGVTDKGELRLPEGLKGIGMGLGPNGEPLRDVARNLPQANNTTNMNLANTA
PTIGAGVLGAVPTAAGVALNGLGSGLSANALNANSALGGGLGLQALGLTGLGALQNQLLQ
QGLTANDLATVLTAQANVNQAASLGIGNNEMNSNVLTSGVMGGNQMNSGPLSNISGTSRP
LGVSVPNQGYGRDTGVQQSTRDKPSDMVIITNLPQTVTWQLIREKFSECGDVKFAEMTAP
DTAIVRFHKEWDAERAIKMFDRTRIDGRTIDVRYF
*(171 a.a.)

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