SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoSK14166_complete:A_BomoSK_comp13480_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X9_[Papilio_machaon]
Ontology
GO:0001525 P angiogenesis
GO:0001958 P endochondral ossification
GO:0002020 F protease binding
GO:0002062 P chondrocyte differentiation
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0007420 P brain development
GO:0008022 F protein C-terminus binding
GO:0008104 P protein localization
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0046872 F metal ion binding
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048738 P cardiac muscle tissue development
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070062 C extracellular exosome
RNA-seq EntryA_BomoSK_comp13480_c0_seq1
Sequence
(Amino Acid)
MRAGGLLAAALLLLSTFTIQVLKAEDIYMEAEDVADNEFLEVKPKDLGLDGHLRRLKRGL
FDSWFSPFDTSSTTEAPPENIESITEDDASFDRKDDDLDTEGSGYPENRVEPEIKEKTLR
VTFVVMEPYREEYVNRDSIQFQNLSKSLADEVNKLFESLPGTQKASLVRIQSCVSDDFSC
KVTLDIVTTGYDNTDVIAQTLRDHIRNRSMLGKVTVNDNDFSAFVIDSANFTCRPNEIQC
GDGACVPESARCNNERDCSDWSDEKNCPIENIPDEEQEQTLEAETESYRPIERGDQPFAS
ETTTPYYDEDEVTVPYPEQFTCSLDEFKCDETRCIRRDEVCNNINDCHDGTDEVDCAKSC
GIDDFTCNNGACIEGFRRCDGAVDCSEGEDEVNCECREDQFRCRSGSCIELRKRCDGYEH
CSDRSDEENCNESGFFKCRNGKLLPVSMKCNRHYDCPEGDYSDEQNCRTLSCPPEKFACS
PTSSVPCAIRCNGFPECDGNEDEDNCPDEECSHQCDGKCLPDANICDSITDCSDGSDELH
CAQCDGPDDYRCDTDECISRNWVCNGHFECPNGEDEADCNSTIVSTPTCDENSWQCRSGQ
CIPSSSYCDNVYNCYDRSDEADCLPSTPAYENEYPPIVSTTLSPYYTTTRRDVGSSNYDR
RPENPYGSENQGTYSPYDDDARRPTTYSPYGPSSERPDPRRPYPPYGSVTTNRPDDRQDP
YSSPPGGEYDPYGQGAGSPDDRRPPYGQSGSQDISLGGGIPYNPESVRQPDNRDPYGGQS
GGEYDPYGRGVSGTDDRRQPGSQDVGPGASGQGNSNQPENRPYRPESGNSVYETGEGQYG
SGSQRGDRGPIPLNIKTYPQDQESVRYGGDVVLQCRDEGPRRAPVRWIREGGRPMRPNYQ
ERKGRLELFGVTPSDSGVYICQAPSYLRQPGAEVRVTLEVETSPVTVRPVFGVCKPHEAT
CGNGQCIPKSAICNSVFDCADHSDEDGCGASGQCEPNEFVCANHKCILKTWRCDSEDDCG
DGSDELNCGTPTPGSPCLAVEFSCASNNQCIPKSFHCDGQSDCVDGSDEIGCAQVYITKP
PQPSYVRLNPGDSLTLRCEAVGVPVPLVSWRLNWGHVPPQCTFTSDNGIGVLTCPNMQPQ
HSGAYSCEAINNKATTFATPDAIVHVNRTDPCPVGYFNSDARSQSECIQCFCFGESTQCR
SADLFTYNMPTPLGEGGTRFVTVTHQARGDISIGAPMNNEYFYQPLRNGATVTRIVPGDM
GWFKDAHPYVTLPETYNGNQLTSYGGHIKYTISPHGSGYGSDDTAPTIIIKGKYFTLFHY
YRGETTKTINIEARLTPENWLILDENGVQAPAQRSTIMMTLDNVEMILLRADLHNAGVNI
TNFAMESAQHINVGLGAASLVEECTCPPGYEGLSCEKCAVGYTRDQSGEWLGTCVRETCP
PGTYGDPSSGYACKPCPCPLTNRENNFASTCALGPDGTVLCNCRPGYEGSNCNICSSNYE
GNPLMPGDSCKPKATKKCNPAGTKQVRFPDECACKVNVQGRHCDQCKNDSFYLSEDFSHG
CALCFCMGVTQQCTSSNLRRTTTAVQFNVPNIVNQVRIYNSSAGRALQAVRYSVPVETEM
RPRIYSGSIDVPIPAVRDNVYYWSLPNGFTGDLVTAYGGYLRYTLDNVPISLNSAPDVQL
ISNTNPTFHYTGNFVPSYDGTLNVSIHLLETGWKRFDGIEIPREHFLVALVDVKAILIKA
TYSQDSPMAIPISASIDKADPNGEGPAALHVEQCVCPPAYTGTSCETCAPGYTRGDRTIY
LKECIPCNCNGHSNMCNPKTGVCYDCKDNTDGPQCELCKPGYDRDGYGNCVESDNFISTQ
QPCRCNPDGVEVPCDETGTCSCKQNVEGDYCDTCRPGTYGLDRNNPQGCLSCYCSGVTSE
CHEGVHYSRIPMAAPVFGENNGGYSLTDLNAEKIYNEHFVPVPDKSELMYIFSYPPENEL
YWSLPIFPGNRVLSYGGSLSIRQEFRSNNDDAVSQSGVDVVLVGKDASVYWSNPTPIRSG
VPLNYQVILSEDNWFLLNTATPVTRNTFMNVLKDLKRVLVRATLDPNVLSTSIADVSMDT
ATIMYEQDLPVAKGVEICMCPAGYTGTSCESCSSGYYKDVSGRCQQCSCNGHDCQLDAYG
QTICNCRPPYTGSDCSTIAGEPSVTTPPNQPPPEVTVFVRIIEPSNIRDLHVGSSVNYTC
QAQSRITNRLRIAWSKADGYLPQGRSQVDENSGVLLLTNLQTSDSGQYICQTSDGYSTAQ
DVVTLIVPGNDMTPPTVSIRPITTDYYEGDRIELECTATGNPAPSISWQRNSRRPLPASA
ESFDDLLIIESARQEDSGEYRCIASNAVSTEVTKVTINVRAKPSWPSQEKLTVSPTSLSI
DEGQSSRAVCTGTQGVPAGSIEWIRQDNAPFVANVRSDNGVLYIEYARPENDGIYVCQSS
SSNVSPQSIIITIIPTYSPDPAKESNISISVDSLKVPAGGSGKIDCNPDGTILPTIKWSK
HGGEFGSETSQRGNTLIINNAKEDDQGYYLCEGIVNGATIASSYVYVEIERRDPPQVDIW
PQGERAVTLGTEYELICRVLGGVPEPDVMWSRGGSRPLSSYVHIRPQNTLKFDHVDVNDE
GEYFCTATNVAGTATARSVIKVRSPPVITITPASFLEAPLGSSVTVECRADGYPLPMVSI
KTSADLRELVRPTPSLAALKIPSIAERDDGDYICTATSAAGTIEEPFAIRVSRGDIGVEY
EFGGSGDDEFPVDYNPNNPTGRSDTLIAYENEPEITIFCNSSEGFNARWDRGDRQSLQRN
AYQVDSRLIIRGVSKSDSGLYVCSLYNRYTGEVVKANYTNLQVVTRPKITLRPANQTVRP
GQSLTVECLVEGDEILDVTWRYDREPSRRVEIRGPVLVFNNIEVEDAGIYYCIARSRYGN
DTATANVIVTGARDANSASLVYIDQPRRKFRVSENVEVICKGRSRDVTFKWERPDTNLYL
VTNPFGGGSRLLINSVQESDAGVYRCIGTDPFGISSYDDFVLEIEPGSGNAVYPGNRDLP
VTHYSARLREAVDMPCNHDLNEPVIIEWKREYSPLPAEVRSNQPILHLESVTEADAGIYV
CRVSNQEVTVTAKAILRVIGVVPLFKGKSWLSLPPLKDAYRQFDIEVYFKPTDLNGLILY
NSQNQGRTGDYIGLRLLDGVPEFIFDAGAEPVIVKGDRPLQLNVWHSIRVSRTDSKVTMD
VDDTGPFITDSEEPWSAVLELNQPMYIGGVPDIDQLPAGLAGSDGFIGCVSTLILGHDEK
NIMLDSLEQYGVDECRSCTPNLCVNDGICQEARNERGYMCICAPGFAGWNCERTGEACRA
GLCGPGKCTETVDGYRCACPMSHTGKNCETKQLIAYPAFTGSAFLAINAPPPSRSMKMSL
KIRAATPVTDGIIMYCAESSRGYGGFTSLTVRNGRLEFRYDLGSGSTPVVLTSDRPLPAN
QWIDIQIARLADSVSMKINLVRSFERRLDRPAESLRFETPMFVGGVDDSTVVVNPNAGVS
GGFSGCIKDVVLNSNAVDINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNC
ICPPGYTGSYCETRIASYLMSPPPPVNPCSLHPCRNGGTCKPDRNSWMNHTCDCPLGYAG
ASCQMPLELGQSVGFNGNGYVELPASLLRYDELASNPAVIALAVHTTNDGVLAYQREGQA
PPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG
VDKSAPATGISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAV
AGRNTQLCRDS
*(1283 a.a.)

- SilkBase 1999-2023 -