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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoSK12266_5prime_partial:A_BomoSK_comp12895_c0_seq1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		retrovirus-related_gag-pol_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
RNA-seq EntryA_BomoSK_comp12895_c0_seq1
Sequence
(Amino Acid)
RVGNLYHVRMSQDDVNNVEMVKKPIDMWHERLGHLNERDLKAMAKNGLVHGLSLKDNEKL
SECEICISEKQTCTPFSKGSEDRTSELLEIVHTDVCGPMRQQSMGGKKYFVTFIDDKSRW
CEVYFIANKSDVLQVFKDYKAYVEKLTGKKIKNLQSDNGREYINKDFDDFLKKEGIRRRL
TAPYTPQQNGISERKNRTLLEMARCMMRQAGSPPVFWAEAINTANYIRNRCPTAALDGQI
PFTLWKRKKPTVIYMRLFGSKAYYKNKGTQKGKFELSSELGIFMGYDTESKAYRIHDPKT
RRIVISRDVKFMNETAFCHEYKEIRNDEEESFDNSKIVVELIGHDQKKENRKTNPMRGRG
RPRIVRTGLVGRPRKEYKPATISTESETESEYEVDNEETTAGIAIIEPKTWKEIEKTDDE
PEWRRALEDEYLAQLKNVTWEIVPRPKNRKVIGSRFVFQTKNTGKKVRLVAKGCSQRPGE
DIYETSSPVVRSSSVRLIAAVSAELGLEMHQMDVVTAYLNGTLEEDVFMEIPDKLSDVLE
SVLANQNIGSKRNIIRDKNILHTAKRWNEALNECENNVCLLKKSLYGLRQSGLQWHKKLV
GRLKNIGFEALPQEPCVFVAQRDEKMMLIAIYVDDIILATNDEVWLHDVKRKLSNAFEMK
DMGKISTCLGIEFSRDKEHRVYLKQGAYIDKVLERYGMSDCKPISTPMDVNVKLEKPNSV
NNDVMSQYPYQNLIGALMYLAVSTRPDIAYTVNYLSQFNTNYDVQHWKAAKRVLRYLKGT
STFGLMYERTGVPLFGVVDADWGANTIDRGHIPVLHLF
*(272 a.a.)

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