SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoN4EE13161_complete:A_BomoN4EE_TR30588_c9_g5_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_cadherin-23_[Bombyx_mori]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0032426 C stereocilium tip
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0048563 P post-embryonic animal organ morphogenesis
GO:0048839 P inner ear development
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060091 C kinocilium
GO:0060122 P inner ear receptor cell stereocilium organization
RNA-seq EntryA_BomoN4EE_TR30588_c9_g5_i1
Sequence
(Amino Acid)
MRARAPPRVRLKLAEYKWVVWLVLIIGGVAANRPPRFLIDGQSEIVVRLKEGPDTPVGSL
IYRLRGVDPDGDTLKFGIREQPGSEILRLEAISANEANIYLVKELDREIRDEYSFVLTLT
DGHLGEGNFITQSFLLLVEDVNDNEPVFKPYSSAITIKENSPAGVITTVEATDLDEGAYG
QVLYYLQELDGDVENFAVQTVNGKGVIRLNNRLDYERKPLYQLRVLAVDRANQGKVNTGT
AAILIKVQDVEDQPPEFVVASPVTRISEDAPVGTAVLQVRAIDGDRGINNRISYSIISGG
EENFDIDSSSGIVYTVNQLDREDPNNSNGAYILEILATEESHEVSPMPSATTEVTIIVTD
VNDETPSFRSPRYVGEVLENAQQSTPITLLQDAIPEVFDYDQGKNGTFELYLIDDNGVFD
VTPFKGINEASFLIRVNDPSFLDYEKVTVMNFSLVAKEIVTKEPKMSIVPITVHIKDEND
NFPEFTESLYTVTIPENCGVGTTVAWVQALDKDSDSYGTRGIRYTNLGGSIANLLSLNPI
SGVITVKQAGGDSFDRELITRHYLTVEARDDLGKGNRNTAQLIINIEDVNDNAPIFLANK
YEARLLENEIEFETPLFLEARDIDLNGTKNSHIEYSIVGGNYKNNFTIDPNLGIITPKGG
LDFEQLPGGNGNIRPIHLTVRARDFGEPSLSSTVPVTIYVQDVNDHAPMFQQIMYKRSIP
EDMPGGTSVLDVKARDADGSSPNNRIVYRIQRGASDKFVIDSRTGVVSVANGSTLDPDKT
NPKSTHYTLTVVALDGGIGDQQLSAAVLVNITIVDVNNKPPVLVEPGSVVVRENIQVGTE
IYRAKAFDLDDQPVLRFGIDKANSVARNEDGIPISINEYDFLNLWDLNAVDGTLRVVRLL
DREKIETFKLVITVEDMAALDVGPRQTATGTLTVTVDDENDNNPVFRKPFYKTSITENSK
NGVNIVNVIADDADRNRTMVYFVEGREEYLNMVHMESTTGELVVANKIDHELYPWINLTV
KAVDSGIPPRYSVVDLVIQVLDENDNNPVFESSAFEYRVREDAEPGTVIAVVSARDADSG
ENGKITYLLDRTSTQGKFLINGDTGALTISDWLDRESQATYNLVVEAWDNYQFGYLSGES
RNAFKQIVVHVEDVNDNPPILHVPPDCTTITEFHNHREPIVSVSASDADDNSTPNGRVQF
HLVAGKGQDLFRFEQVGGDANTGRLFARQSLKDRFGNYTLIVEARDLGTPANAVRGELRV
CVTDYNDHAPVFVHPQQNVTIKVPENATIGTTIIEAKAIDADIGPNGAVRYRLRRDAGGS
WRAFSLHATSGALRTLIPLDRDKQTTYQLRIEAYDLGLPTPLSSDLDLTVYVQNVDNYRP
RFPFKSFSLNVTENDRSESVFLPSVIERDAIDRGDEPVLPVCYYIVNGNDDDAFHLHKTT
HKLTTLKPLDREQKSNYTLTILATEDCVKIPQYTSDLDYVSTLTVHITVNDVNDNAPKFL
RKIFTGGITTKADFGIEFMQVQAIDIDDGDNAKISYYQIGDIKQTLTEGLENLAVLPFLV
NPETGAVSLNFDPQKGMKGYFDFQVLANDTGGLQDEAHVFIYLLREDQRVRFVLRAHPSE
VRDRINGFREHLARVTGSVVNVDDLRVHENKDGSVDNTKTDLYLHLVNGRDHSVLEVSQV
LKIVDENIEYLDELFKEFNVLDTQPAEYQPLTAETMASNQTVFWLVWTTLFLAVLLVLAI
MMCVSQRADYVRRLKAATATAYSSAIPGESDMTIRSTGGRVPNTNKHSTKGSNPIWLHAY
ENDWYKSDDQLSRSERDSLDENAVDQDLSNEKPYFITTAAFPSIDSNVTEPQTNQANSDL
YQQLEQLKNAKNMETTEL
*(625 a.a.)

- SilkBase 1999-2023 -