SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoN4EE10778_5prime_partial:A_BomoN4EE_TR28662_c0_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_IIB_[Amyelois_transitella]
Ontology
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
RNA-seq EntryA_BomoN4EE_TR28662_c0_g1_i1
Sequence
(Amino Acid)
RRQSHRRLCFLTTMASTSRIEANKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDV
GSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNIS
STDRALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIAC
RQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSVDLITTADFMSRFCSNLGLPNSV
QRAATHIARKAGELDIVSGRSPISVAAAAIYMASQASEDKRSQKEIGDIAGVADVTIRQS
YKLMYPSAARLFPEDFKFATPIEFLPQM
*(108 a.a.)

- SilkBase 1999-2023 -