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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG20789_5prime_partial:A_BomoMSG_c26768_g1_i5
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0001525 P angiogenesis
GO:0001958 P endochondral ossification
GO:0002020 F protease binding
GO:0002062 P chondrocyte differentiation
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0007420 P brain development
GO:0008022 F protein C-terminus binding
GO:0008104 P protein localization
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0046872 F metal ion binding
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048738 P cardiac muscle tissue development
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070062 C extracellular exosome
RNA-seq EntryA_BomoMSG_c26768_g1_i5
Sequence
(Amino Acid)
PYGGQSGGEYDPYGRGAGSPDDRRPPYGQSGSQDISLGGGIPYNPESVRQPDNRDPYGGQ
SGGEYDPYGRGVSGTDDRRQPGSQDVGPGASGQGNSNQPENRPYRPESGNSVYETGEGQY
GSGSQRGDRGPIPLNIKTYPQDQESVRYGGDVVLQCRDEGPRRAPVRWIREGGRPMRPNY
QERKGRLELFGVTPSDSGVYICQAPSYLRQPGAEVRVTLEVETSPVTVRPVFGVCKPHEA
TCGNGQCIPKSAICNSVFDCADHSDEDGCGASGQCEPNEFVCANHKCILKTWRCDSEDDC
GDGSDELNCGTPTPGSPCLAVEFSCASNNQCIPKSFHCDGQSDCVDGSDEIGCAQVYITK
PPQPSYVRLNPGDSLTLRCEAVGVPVPLVSWRLNWGHVPPQCTFTSDNGIGVLTCPNMQP
QHSGAYSCEAINNKATTFATPDAIVHVNRTDPCPVGYFNSDARSQSECIQCFCFGESTQC
RSADLFTYNMPTPLGEGGTRFVTVTHQARGDISIGAPMNNEYFYQPLRNGATVTRIVPGD
MGWFKDAHPYVTLPETYNGNQLTSYGGHIKYTISPHGSGYGSDDTAPTIIIKGKYFTLFH
YYRGETTKTINIEARLTPENWLILDENGVQAPAQRSTIMMTLDNVEMILLRADLHNAGVN
ITNFAMESAQHINVGLGAASLVEECTCPPGYEGLSCEKCAVGYTRDQSGEWLGTCVRETC
PPGTYGDPSSGYACKPCPCPLTNRENNFASTCALGPDGTVLCNCRPGYEGSNCNICSSNY
EGNPLMPGDSCKPKATKKCNPAGTKQVRFPDECACKVNVQGRHCDQCKNDSFYLSEDFSH
GCALCFCMGVTQQCTSSNLRRTTTAVQFNVPNIVNQVRIYNSSAGRALQAVRYSVPVETE
MRPRIYSGSIDVPIPAVRDNVYYWSLPNGFTGDLVTAYGGYLRYTLDNVPISLNSAPDVQ
LISNTNPTFHYTGNFVPSYDGTLNVSIHLLETGWKRFDGIEIPREHFLVALVDVKAILIK
ATYSQDSPMAIPISASIDKADPNGEGPAALHVEQCVCPPAYTGTSCETCAPGYTRGDRTI
YLKECIPCNCNGHSNMCNPKTGVCYDCKDNTDGPQCELCKPGYDRDGYGNCVESDNFIST
QQPCRCNPDGVEVPCDETGTCSCKQNVEGDYCDTCRPGTYGLDRNNPQGCLSCYCSGVTS
ECHEGVHYSRIPMAAPVFGENNGGYSLTDLNAEKIYNEHFVPVPDKSELMYIFSYPPENE
LYWSLPIFPGNRVLSYGGSLSIRQEFRSNNDDAVSQSGVDVVLVGKDASVYWSNPTPIRS
GVPLNYQVILSEDNWFLLNTATPVTRNTFMNVLKDLKRVLVRATLDPNVLSTSIADVSMD
TATIMYEQDLPVAKGVEICMCPAGYTGTSCESCSSGYYKDVSGRCQQCSCNGHDCQLDAY
GQTICNCRPPYTGSDCSTIAGEPSVTTPPNQPPPEVTVFVRIIEPSNIRDLHVGSSVNYT
CQAQSRITNRLRIAWSKADGYLPQGRSQVDENSGVLLLTNLQTSDSGQYICQTSDGYSTA
QDVVTLIVPGNDMTPPTVSIRPITTDYYEGDRIELECTATGNPAPSISWQRNSRRPLPAS
AESFDDLLIIESARQEDSGEYRCIASNAVSTEVTKVTINVRAKPSWPSQEKLTVSPTSLS
IDEGQSSRAVCTGTQGVPAGSIEWIRQDNAPFVANVRSDNGVLYIEYARPENDGIYVCQS
SSSNVSPQSIIITIIPTYSPDPAKESNISISVDSLKVPAGGSGKIDCNPDGTILPTIKWS
KHGGEFGSETSQRGNTLIINNAKEDDQGYYLCEGIVNGATIASSYVYVEIERRDPPQVDI
WPQGERAVTLGTEYELICRVLGGVPEPDVMWSRGGSRPLSSYVHIRPQNTLKFDHVDVND
EGEYFCTATNVAGTATARSVIKVRSPPVITITPASFLEAPLGSSVTVECRADGYPLPMVS
IKTSADLRELVRPTPSLAALKIPSIAERDDGDYICTATSAAGTIEEPFAIRVSRGDIGVE
YEFGGSGDDEFPVDYNPNNPTGRSDTLIAYENEPEITIFCNSSEGFNARWDRGDRQSLQR
NAYQVDSRLIIRGVSKSDSGLYVCSLYNRYTGEVVKANYTNLQVVTRPKITLRPANQTVR
PGQSLTVECLVEGDEILDVTWRYDREPSRRVEIRGPVLVFNNIEVEDAGIYYCIARSRYG
NDTATANVIVTGARDANSASLVYIDQPRRKFRVSENVEVICKGRSRDVTFKWERPDTNLY
LVTNPFGGGSRLLINSVQESDAGVYRCIGTDPFGISSYDDFVLEIEPGSGNAVYPGNRDL
PVTHYSARLREAVDMPCNHDLNEPVIIEWKREYSPLPAEVRSNQPILHLESVTEADAGIY
VCRVSNQEVTVTAKAILRVIGVVPLFKGKSWLSLPPLKDAYRQFDIEVYFKPTDLNGLIL
YNSQNQGRTGDYIGLRLLDGVPEFIFDAGAEPVIVKGDRPLQLNVWHSIRVSRTDSKVTM
DVDDTGPFITDSEEPWSAVLELNQPMYIGGVPDIDQLPAGLAGSDGFIGCVSTLILGHDE
KNIMLDSLEQYGVDECRSCTPNLCVNDGICQEARNERGYMCICAPGFAGWNCERTGEACR
AGLCGPGKCTETVDGYRCACPMSHTGKNCETKQLIAYPAFTGSAFLAINAPPPSRSMKMS
LKIRAATPVTDGIIMYCAESSRGYGGFTSLTVRNGRLEFRYDLGSGSTPVVLTSDRPLPA
NQWIDIQIARLADSVSMKINLVRSFERRLDRPAESLRFETPMFVGGVDDSTVVVNPNAGV
SGGFSGCIKDVVLNSNAVDINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTN
CICPPGYTGSYCETRIASYLMSPPPPVNPCSLHPCRNGGTCKPDRNSWMNHTCDCPLGYA
GASCQMPLELGQSVGFNGNGYVELPASLLRYDELASNPAVIALAVHTTNDGVLAYQREGQ
APPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVD
GVDKSAPATGISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTA
VAGRNTQLCRDS
*(1043 a.a.)

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