SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG15926_3prime_partial:A_BomoMSG_c25336_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		histone_deacetylase_6_isoform_X1_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0033558 F protein deacetylase activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070932 P histone H3 deacetylation
RNA-seq EntryA_BomoMSG_c25336_g1_i1
Sequence
(Amino Acid)
MEIRDHFQIAMESKTLVKGPTGFVTEPRMGEHRCLWDENYPECPERLISVIKRCQELNLV
QRCKHLEPRAATKEELCVLHAPSVYEMLETTHGNDDAAYLEELSSKFDAIYIHPSTHELA
LISAGSTIDMVDSIVSGEVQNGAAFVRPPGHHAMHSEPCGYCFYNNVALAAKHALDKRGL
QRILIVDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGSFWPQLRQSDFHYVGSGAGKGYN
FNVPLNKTGMKDGDYLAIWHQLLLPMAYEYQPELIIVSAGYDAAIGCPEGEMEVSPACYA
VLLHALQSVTSRVCVVLEGGYCLTSLAEGAALTLRTLLGDAPPKLEPPTPPCDSIRDTIL
DCIYAHRQYWSCYSYQPARGDRHEVLVRWRGDETRPSRFATR
(133 a.a.)

- SilkBase 1999-2023 -