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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG15801_5prime_partial:A_BomoMSG_c25274_g1_i3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
RNA-seq EntryA_BomoMSG_c25274_g1_i3
Sequence
(Amino Acid)
VALRDMRAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQAVGGVVAEPYIVVWDVRCLR
GSNPGQGGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHVSLLHVNAPEERQSIFKVETHS
SQCNVMDVASTSQALAFGDQSGHLNLFSPTQNHEPVYNNFSRSTEFADPVEGLPYVRFSD
TRFQYSSVPLPQLASGGKWFNELPPEFFRKVYRKPKPVDPEVLKSMKMQGPIGYAPNPKT
FKRNQMPYLEESLEEMSISKINGNKVIMQPIPKHYQKLDIRYNKHGPNEELESFNKTGQP
GLEATLPNSYCNAMLQVLYYTPPVKATLLAHTCAKEFCLSCELGFLFRMLDTSGGTPCQA
TNFLRAFRTVPEAAALGLILPDRAPDIRVDLVALIQSWNRFILHQIHYEILETRKKEKEL
ALIANSPPKAPRASNPKERHSLMNGQYSEECQYTELEFLGPTEFDCQEDGELWPGRDEGV
DGVGPLQNHESHELNNRQAHREETEISQLFAIGRHQLNRCLKCNKEEGRESVVLACALQY
PPTGAGGAGEARGGFVELVRASLAARRSTPAWCDHCSRFTPTTQRGRLLRLPPILAINCG
GVTVREKAYWAKGVQKEMSDSKRGGSGKPCRYGLHCARPGCHFKHPDRPNTSQSSSKGSS
QESHCMLPLQLLIRLQSDGDVIINDKIETNSAESSPINRPDTSRHNKKYVTTHLEEEYSL
SAAVVCVEDNPKNLVAYIHTVRDGETQWFMYNDLCIVPVSTDEVIHFGVWWKTPCVLFYT
ATGGGQCNGDVSS
*(263 a.a.)

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