SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG15793_5prime_partial:A_BomoMSG_c25271_g2_i2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101746153_isoform_X1_[Bombyx_mori]
Ontology
GO:0000077 P DNA damage checkpoint signaling
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001104 F transcription coregulator activity
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008134 F transcription factor binding
GO:0035064 F methylated histone binding
GO:0042162 F telomeric DNA binding
GO:0042393 F histone binding
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1990391 C DNA repair complex
RNA-seq EntryA_BomoMSG_c25271_g2_i2
Sequence
(Amino Acid)
CALPIWGRRPMAAKTKRAVLPTQPEEAEFMYDMNSPEMVPSNGDGGHSPKSPKDEKPLSS
MVATPKSVSKLKQKRRPNSPRPATPVDKMMKQEYPGHAPDTVVLAKWVDKRYYSGKVVEI
TDLNKYLIKFDDGQTKVLLDDFIIFGDMKTLPLTGQLVYAVVDEEQNYEPGLVLGVEEND
SGTITYKCATNGDTLVVVTASELYLTEEQARALKDAGRPRSPTTPNTTPRRRNHRELDLD
NIIQGPRSARSRDKGSSSARKRVASPKSPKASTSGLKTKIAVAGRKRVASESSEISESSN
SAPSTTRLEEVAGVEPELQRTPRKIDGVKAGPFQLKGAAKQNIGKKNSKLTKFENDADTV
SQLGPIPDGDHKIFKGMYFLLTCAATSKRSRVDKEKERDKKKEKERADNSTDARQYSSEE
DSEAPSTVGTDTEDFEFSTRPFNKERLKEQLEAGGGVVYSHFDEIPKNKYAVCKLIAPRP
CLTAKYIQCLASDVRAVLHDWVIASCSRKILPDVDAHALPAGLSVLHRRYITWDPPGERR
NATFFKDKIILLCGDQDTFVKFWERVCNLTGATTRVVNEEDLNMTGAFVLVTDWECPHEV
QNKANQDGIPLVSTHWVIECLIQAEIVDPTCHDSFSFMYTEPE
*(213 a.a.)

- SilkBase 1999-2023 -