SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG15619_3prime_partial:A_BomoMSG_c25201_g1_i1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
RNA-seq EntryA_BomoMSG_c25201_g1_i1
Sequence
(Amino Acid)
MRRNKKKSTRARASPAGDAQGQHPVSVESGRGLSHHGRVRRKTQAQNVREMRLRYASWNV
GSMTGKGRELVDVLKRRRINIACLQETRWKGAKAREIGEGYKLYYSGSDGRRNGVGVVLD
KDLKDCVAHVIRTSDRIITVKIVCESVILNVISVYAPQSGCKEHVKEKFWQDFDSVMIRI
PESEEICIGGDFNGHVGATNEGYERVHGGWGYGNRNDDGDQLLQAATTFNLAVANTWFQK
RPEHLITYKSGKHATQIDYFLIKRSKLVCVKNCKVLPGEALVTQHRLLLMDITISYKYLR
RKNRLSSKIRWRMLETDEYAGRFREIMIENILEMKDMKEKSANDCWDEMANSVRKTAKAV
LGESKGKGIIDKDTWWWNENVQRELKEKKNAFKKWQLERGNESERQARKNEYRECKKKAT
KAVAIARSDAQKRLYAALDGPRGQKELYRITRAREERAKDIKHVRCMKNETGKVLMRDDE
IKERWKIYFEKLMNEENDWNRVINRKPENVGLVNEISMYEVREAVRSMKSGKSEGPDGIP
VEVWKILGEDGYKWLTLFFNKLLQEEVIPTEWSISTLVPIYKNKGDVQDCGSYRGIKLMS
HSMKVWEKVIEKRLGDESEITQNQFGFMPGRGTTDAIFALRQVCEKHRDVHRNLHMVFVD
LEKAYDRVPRAVLWWALNEKGIPGKYVRLICAMYSRARTYVRTAAGNSDEFNVAVGLHQG
SALSPYLFLLVMDALTSEIQEEPPWCMLFADDIVLVGENGLEVQNILEKWRCKLESVGLK
ISRSKTEHLFCDFGGLSNFAPISLDGTPLPVCQDFRYLGSVIQSDGELDRTVRHRIDAGW
MKWRQVTGTICDSHIPLPLKGKIYKTLIRPAVLYGSACWTTKVADERRL
(295 a.a.)

- SilkBase 1999-2023 -