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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG15549_3prime_partial:A_BomoMSG_c25176_g2_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		roquin-1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0001782 P B cell homeostasis
GO:0002634 P regulation of germinal center formation
GO:0002635 P negative regulation of germinal center formation
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0010494 C cytoplasmic stress granule
GO:0010608 P posttranscriptional regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0030889 P negative regulation of B cell proliferation
GO:0033962 P P-body assembly
GO:0035613 F RNA stem-loop binding
GO:0042098 P T cell proliferation
GO:0042129 P regulation of T cell proliferation
GO:0043029 P T cell homeostasis
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0045623 P negative regulation of T-helper cell differentiation
GO:0046007 P negative regulation of activated T cell proliferation
GO:0046872 F metal ion binding
GO:0048535 P lymph node development
GO:0048536 P spleen development
GO:0050856 P regulation of T cell receptor signaling pathway
GO:0050863 P regulation of T cell activation
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0061470 P T follicular helper cell differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0071347 P cellular response to interleukin-1
GO:1901224 P positive regulation of NIK/NF-kappaB signaling
RNA-seq EntryA_BomoMSG_c25176_g2_i2
Sequence
(Amino Acid)
MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVE
PEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLKCSGNAN
MSGNGNRLSRPMQRKLVTLLQCSITDEEGRGRAARAARSLGERTVTELILQHQNPQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS
IGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIAPD
QWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDKLA
NIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQAAGKDMNQGQKDLRNEPSTSQSS
PQARTTPTPTQGRYKMAMCKDVLRSLCPRGNSCMYAHSEEELERYRAMMANINGHFQFMP
GIVGVPALQHGLTPMQPGLAPILPGQPIHIIPNMYNQFAMPQHVDPSAFGAQSMQGMPPQ
SMQSQGIQPQSMQSQGIQPQSMQPQGTTLQSMQSQGMQPQSIQS
(193 a.a.)

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