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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMSG13698_complete:A_BomoMSG_c24460_g1_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		superkiller_viralicidic_activity_2-like_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_BomoMSG_c24460_g1_i2
Sequence
(Amino Acid)
MSDINSLFDCFDETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKP
REEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYS
FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ
KYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYM
RDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVIYTEYRPTPLQ
HYIFPAGGDGIHLVVDEKGIFKEDNFNTAMTVLNNAGEAAKGDQRGRRGGPRDKNQTNIF
NIVKMIMERNFAPVIIFSFSKKDCELYALQMAKLDFNTIEEKKLVDEVFSNAMDVLSEED
RKLPQVENVIPLLRRGIGIHHGGLLPILKETIEILFGLGLIKALFATETFAMGLNMPART
VVFTNCQKFDGKEVRFISSGEYIQMSGRAGRRGLDDKGIVILMIDEKVTPTVVKGMVQGK
ADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQAAIPDLIDKVKAKQKQYDAL
SVNEENSVASYSTIRTQLDLLGDQFRSFITKPEYLKPFLQPGRLVKVKTEKYEYDWGIIV
NFRHKSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVV
HTLIYQISSLRVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMKINDSVFKQ
CVDRIKLLEERLYSHPIHTDKNRSALTAAYDKKQELYEELQNAKAELKKAKSILQMDELK
KRKRVLRRLGYCTAADVIEMKGRIACELSSADELLLTELIFNGVFNALSPEQSAALISCF
VCDENSTQASVSGEELRGVLRQLQEYARRIAKVSIDSKMDLDEDTYVSKFKCTLMDVVLS
WAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSDAIKMLKR
DIVFAASLYM
*(342 a.a.)

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