SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoMG23927_5prime_partial:A_BomoMG_comp41030_c3_seq13
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
RNA-seq EntryA_BomoMG_comp41030_c3_seq13
Sequence
(Amino Acid)
LSSFSECRKDKQKLKQRKENDVPQAMLQGDAPARKRSKLVLPEPQVTDQELQQVVKLGRA
SEAAREAASGGAAAATDALVAQYALTPAPATALRTPAQHDRILMEAQNVMALTHVDTPLK
GGLNTPLHESDFSGALPQNQVVATPNTVLATPFRSSRSEVSTPGSFNTPGHGNSQLGLTP
GLRDKLNINPEDRVNGGDTPQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGED
KDDSAAVVSVEDQADADARYAKEQEEKRAAELSRRSLAVQRGAARPADVNVSVLRGAASL
SALTPLQHAEELLKAEMVTMLHYDALRDPPEGVDKKRAIQLQASHLAYLEQHPYEEFADE
ELAAAKEALKKEMEVVKAGMSHGDLSIDAYTQVWEECLAQVLFLPGQHRYTRANLASKKD
RLESAEKRLEQNRNHMAKEAKKCSKMEKKLRVLTGGYQSRAAALIKQFQELQDQIEQANL
ELSTFKFLAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYSELQAEVENMQKGKKSQVS
ENVNSQKTTA
*(182 a.a.)

- SilkBase 1999-2023 -