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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoIG12868_5prime_partial:A_BomoIG_DN31365_c2_g3_i7
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
Ontology
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
RNA-seq EntryA_BomoIG_DN31365_c2_g3_i7
Sequence
(Amino Acid)
SFAVKMATANDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMD
PRQGVIDRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLV
SPTNPKIKEVIMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKRGSGHGGCG
HYQPSIRRQGLELTAEWKHANEDTQEKKIFVSAERVWEILKHITDEDSFILGMDPNFARP
DWMIVTVLPVPPLCVRPAVVMFGSAKNQDDLTHKLADIIKANNDLEKNEQSGAAAHVLAE
NIRMLQFHVATFVDNDMPGMPKAMQKSGKPLKALKARLKGKEGRIRGNLMGKRVDFSART
VITPDPNLRIDQVGVPRSIAQNMTFPELVTPFNLDRMQELVRRGNAQYPGAKYIVRENGE
RIDLRFHPKSSDLHLLYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMN
LSCTSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAV
RKMTKRDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGPVNMIRT
HSTHPDEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAGSLLHICMLELGHETA
GRFYGNIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMEL
EPTPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVI
ACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGRE
GLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQN
LPTVKLSNKAFEKKFKFDSSNERYLKRIFSEDIVRELTESGSVIADLESEWEQLSKDRET
LRQIFPTGESKVVLPCNFKRMIWNAQKTFHINKRIPTDLSPIKVIKGVSDLLKKCVIVAG
DDRLSKQANENATLLFQCLVRSTLCTKFVSEEHRLSSVAFEWLIGEIEARFQQAQVNPGE
MVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTG
GAARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPA
KISPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNE
ESKFQDHDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRITITE
QGEFKAIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNA
VLQFYGLYVNYRHLALLCDVMTAKGYLMAITRHGINRQDTGALMRCSFEETVDVLLDAAS
HAEVDPMRGVSENIIMGQLPRMGTGCFDLLLDGEKCKEAMGGLGGAEVGMYFGVGTPSMS
PLMTPWSTQNTPGYGSSVWSPCQGKSKR
*(508 a.a.)

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