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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoBR10256_complete:A_BomoBR_DN31380_c3_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		collagen_alpha-1(XVII)_chain_isoform_X1_[Bombyx_mori]
Ontology
GO:0001501 P skeletal system development
GO:0001503 P ossification
GO:0003674 F molecular_function
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005588 C collagen type V trimer
GO:0005788 C endoplasmic reticulum lumen
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0043588 P skin development
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048592 P eye morphogenesis
GO:0071230 P cellular response to amino acid stimulus
GO:1903225 P negative regulation of endodermal cell differentiation
RNA-seq EntryA_BomoBR_DN31380_c3_g1_i2
Sequence
(Amino Acid)
MAMVISQTTKAAIGGFLALMILGAVLVVGAAFGWFDPKREDEDTPAKISARLQGRTSFVT
HRAVNPDENHLPVVSHSSPFYVGDKSGSTDATAVQGTCRCSLNDISQILEVMPELRGPPG
PQGPTGADGTTGAPGKTGQIGDPGPAGPPGSKGDRGERGDTGNSGPEGQPGPKGDPGADG
SPGPQGPQGPPGLPGPVTSALIESTGLYGSVNPGIQGPQGERGPMGLPGPQGERGYPGNK
GERGLLGPKGDKGDRGYVGLRGPHGAKGEKGPPGRDGVPGLPGAHGRPSEKGEKGARGLP
GLPGPPMPTISDNAVLSDITRTEASLLKGPKGDRGETGEKGEKGNRGLEGPQGFPGVDGK
PGERGDIGPSGLPGTQGSTGLPGSKGERGEPGPPGPVAISRDDAMVMTKGDKGDAGPRGK
RGHPGPPGPRGPPGLPGPPGTPGVNGPTGDIGLPGWAGPPGATGQPGPPGPKGEKGDSAV
NPLDLEKIKGDKGDRGFDGNPGAPGKDGPRGPPGPPGTPASNVQYVPVPGPPGPPGPPGT
SLGLPKDSVDTLTDSPGVRREPNTGM
*(188 a.a.)

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