SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomoASG17620_5prime_partial:A_BomoASG_c29927_g1_i3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_pre-mRNA-processing_factor_6_[Bombyx_mori]
Ontology
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006403 P RNA localization
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0043021 F ribonucleoprotein complex binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0050681 F androgen receptor binding
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_BomoASG_c29927_g1_i3
Sequence
(Amino Acid)
DLRYRQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL
SRNLGGESSSSIDPGSGLASMMPGVVTPGMLTPSGDLDLRKIGQARNTLMTVKLSQVSDS
VTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEV
TGKVQTARNLIMKGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNLPHSVRIWVKAAD
LEQEAKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPTSVELWLALA
RLESYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAITSLSANGVEI
NREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAEACATEGAFECARA
VYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAKSKWLA
GDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASAPTPRVMIKS
AKLEWALNNLDVAIKLLDEAIKVFGDYAKLHMMKGQIEEQMAKDEDAHNTYSQGLKKCPT
SVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRNGSPEIANAVMA
KALQECPSAGRLWADAIFMESRPQRKTKSVDALKKCEHDAHVLLAVSQLFWTERKLNKCR
EWFNRTVKIDPDLGDAWAYFYKFELLHGNEQQQEDVKSRCRAAEPHHGEYWCKVSKDIVN
WCFSTDQILLLVAKNLPVPS
*(266 a.a.)

- SilkBase 1999-2023 -