SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomaMG2007_internal:A_BomaMG_comp13111_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]
Ontology
GO:0000176 C nuclear exosome (RNase complex)
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0030707 P ovarian follicle cell development
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
GO:0035327 C euchromatin
GO:0035363 C histone locus body
RNA-seq EntryA_BomaMG_comp13111_c0_seq2
Sequence
(Amino Acid)
GVYRCGVQLAREPLLRATLRDALRERATVSVKPTAKGIKEIDENHACYSLKYLKKKPVRD
ITGEQFLKLTMAAEDKLLVVTISEQIEGNTTPSYLEELKQLYQKDEFAATVQAWNELRSE
AVTIALTKIVMPELRRELHAVLLQESKDYVLKCCRRRLYDWLKVAPYESRISDDDDEWDA
SNGVRVMSVAYVPDRAHSAFACIVGPGGEVADHLRLPHLLYRRNAWDALERRNKDADMTA
LRRFICRKKPHVIVIGGESREALNVKADISDCVQQLVEDEQFPRIPIEIADNHFSKIYSN
SIRGRNDFREYPDILRQAICQGRLLQDPLMEISQLCGPDEEILCLRYHPLQDQIAKDDLL
EGIELEFVNRVNEVGVDVNEAVLTGRGTELLQYVCGLGPRKAQALIKLFKQTNQKLENRT
QLVTVCHMGPKVFINCSGFIRIDTNSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALE
YEDEDANPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAEL
(176 a.a.)

- SilkBase 1999-2023 -